RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SFRP4Q6FHJ7 346 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-211ENST00000466054 LAYNQ6UX15 382 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 GAS2L3Q86XJ1 694 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 ADGRG5Q8IZF4 528 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 SAMD3Q8N6K7 520 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 VGLL2Q8N8G2 317 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 DPF1Q92782 380 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 TNIP3Q96KP6 325 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 OSBPL9Q96SU4 736 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 TBCBQ99426 244 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 NELL2Q99435 816 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 MESP1Q9BRJ9 268 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 COLEC11Q9BWP8 271 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 SERHLQ9NQF3 203 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 CHST12Q9NRB3 414 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 INTS13Q9NVM9 706 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 ZSCAN32Q9NX65 697 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 CORO2BQ9UQ03 480 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 PYCARD-AS1I3L0S3 204 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 DCLK1O15075 740 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 TRIAP1O43715 76 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 CCKBRP32239 447 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 NPTX2P47972 431 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 PRIM2P49643 509 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 NDUFV1P49821 464 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 TUBA4AP68366 448 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 MC2RQ01718 297 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 ZNF543Q08ER8 600 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 EIF2B5Q13144 721 aaKnown RBP5.21□□□□□ -1.58
LRCH3-211ENST00000466054 BOP1Q14137 746 aaKnown RBP5.21□□□□□ -1.58
LRCH3-211ENST00000466054 BRD3Q15059 726 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 C3orf38Q5JPI3 329 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 RUSC1-AS1Q66K80 236 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 MPP5Q8N3R9 675 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 SDR16C5Q8N3Y7 309 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 IPCEF1Q8WWN9 437 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-211ENST00000466054 GJA10Q969M2 543 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 SPSB4Q96A44 273 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 TMEM125Q96AQ2 219 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 MYD88Q99836 296 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 ELAC2Q9BQ52 826 aaKnown RBP5.21□□□□□ -1.58
LRCH3-211ENST00000466054 WACQ9BTA9 647 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 TTYH3Q9C0H2 523 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 MS4A7Q9GZW8 240 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-211ENST00000466054 NRIP3Q9NQ35 241 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 XPNPEP3Q9NQH7 507 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 STARD7Q9NQZ5 370 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 ENTPD2Q9Y5L3 495 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 WNT6Q9Y6F9 365 aa5.21□□□□□ -1.58
LRCH3-211ENST00000466054 POLR2AP24928 1970 aaKnown RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 A0A0B4J269 797 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 CCDC151A5D8V7 595 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 WIPF3A6NGB9 483 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 RASA4BC9J798 803 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 CCP110O43303 1012 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 RASA4O43374 803 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 MYL3P08590 195 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 PARP1P09874 1014 aaKnown RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 SRGNP10124 158 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 PPIFP30405 207 aaKnown RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 PXNP49023 591 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 ALDH5A1P51649 535 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 GRM1Q13255 1194 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 TUBB3Q13509 450 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 LONRF1Q17RB8 773 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 CD300EQ496F6 205 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 DCAF12L1Q5VU92 463 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 FAM9AQ8IZU1 332 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 OR56A3Q8NH54 315 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 RPL36ALQ969Q0 106 aaKnown RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 SLC39A13Q96H72 371 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 TIMP4Q99727 224 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 PTDSS2Q9BVG9 487 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 SMOC2Q9H3U7 446 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 NLRC4Q9NPP4 1024 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 TBC1D30Q9Y2I9 924 aa5.2□□□□□ -1.58
LRCH3-211ENST00000466054 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-211ENST00000466054 POM121BA6NF01 834 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 TMEM233B4DJY2 109 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 F5H697 171 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 F8W8V4 182 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 KPNA5O15131 536 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 ANXA2P07355 339 aaKnown RBP5.19□□□□□ -1.58
LRCH3-211ENST00000466054 TXNP10599 105 aaKnown RBP5.19□□□□□ -1.58
LRCH3-211ENST00000466054 TSHRP16473 764 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 CHRM3P20309 590 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 HTR3AP46098 478 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 STT3AP46977 705 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 ZNF134P52741 427 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 LILRA4P59901 499 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 HTRA4P83105 476 aaPredicted RBP5.19□□□□□ -1.58
LRCH3-211ENST00000466054 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
LRCH3-211ENST00000466054 INSCQ1MX18 579 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 ZNF626Q68DY1 528 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 FCRLBQ6BAA4 426 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 TMEM108Q6UXF1 575 aa5.19□□□□□ -1.58
LRCH3-211ENST00000466054 AMIGO2Q86SJ2 522 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms