RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SMARCD1Q96GM5 515 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 CRISPLD1Q9H336 500 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 LZTFL1Q9NQ48 299 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 MYO1AQ9UBC5 1043 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 DUSP10Q9Y6W6 482 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ATP8B3O60423 1300 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 FSCN2O14926 492 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 TEX28O15482 410 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 LPXNO60711 386 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 GABBR2O75899 941 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ERBB2P04626 1255 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 IRS1P35568 1242 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 GPR15P49685 360 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 PTP4A2Q12974 167 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 GPR17Q13304 367 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SDHAF4Q5VUM1 108 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ERICH1Q86X53 443 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 PHF13Q86YI8 300 aaPredicted RBP18.18■□□□□ 0.5
PTPRU-206ENST00000465525 REXO1L1PQ8IX06 675 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 MCOLN2Q8IZK6 566 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 SLC35F5Q8WV83 523 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ZNF653Q96CK0 615 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 PPP1R13BQ96KQ4 1090 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 RXFP1Q9HBX9 757 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 ADAM22Q9P0K1 906 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 FNIP2Q9P278 1114 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 PCDHB5Q9Y5E4 795 aa18.18■□□□□ 0.5
PTPRU-206ENST00000465525 HIDE1A8MVS5 230 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 RFXAPO00287 272 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 CNPP09543 421 aaKnown RBP18.17■□□□□ 0.5
PTPRU-206ENST00000465525 SETSIPP0DME0 302 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 MMP8P22894 467 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 ADCY1Q08828 1119 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
PTPRU-206ENST00000465525 PTPROQ16827 1216 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 C10orf76Q5T2E6 689 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 PIGZQ86VD9 579 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 ZSCAN30Q86W11 494 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 GDPD5Q8WTR4 605 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 TTYH1Q9H313 450 aaPredicted RBP18.17■□□□□ 0.5
PTPRU-206ENST00000465525 SYNCQ9H7C4 482 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 MYO7AQ13402 2215 aa18.17■□□□□ 0.5
PTPRU-206ENST00000465525 E5RJQ4 531 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 F8VP50 259 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 XPO1O14980 1071 aaKnown RBP18.16■□□□□ 0.5
PTPRU-206ENST00000465525 GJB6O95452 261 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 SPATA31D3P0C874 917 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 RRM1P23921 792 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 GRIK1P39086 918 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 ARHGAP25P42331 645 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 DUSP4Q13115 394 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 ZNF697Q5TEC3 545 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 SPATA31D4Q6ZUB0 917 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 GPRIN1Q7Z2K8 1008 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 LRCH3Q96II8 777 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 SEPT5Q99719 369 aaPredicted RBP18.16■□□□□ 0.5
PTPRU-206ENST00000465525 EMILIN2Q9BXX0 1053 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 LUC7LQ9NQ29 371 aaKnown RBP18.16■□□□□ 0.5
PTPRU-206ENST00000465525 MYO16Q9Y6X6 1858 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 TRANK1O15050 2925 aa18.16■□□□□ 0.5
PTPRU-206ENST00000465525 ANKRD62A6NC57 917 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 C2orf71A6NGG8 1288 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 ZSCAN12O43309 604 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 LCP1P13796 627 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 SLC8A3P57103 927 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 DDR2Q16832 855 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 HABP4Q5JVS0 413 aaKnown RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 GPR152Q8TDT2 470 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 CTNNBL1Q8WYA6 563 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 MRPL38Q96DV4 380 aaKnown RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 NOX5Q96PH1 765 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 MIS12Q9H081 205 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 DMAP1Q9NPF5 467 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 CNOT8Q9UFF9 292 aaKnown RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 PAXBP1Q9Y5B6 917 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 MACROD2A1Z1Q3 448 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 GOLGA8SH3BPF8 625 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 SEC24AO95486 1093 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 TMEM253P0C7T8 217 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 PLA2G4AP47712 749 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 NDUFV1P49821 464 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 IFRD2Q12894 506 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 RAB33AQ14088 237 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 MGAT5BQ3V5L5 792 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 CFAP221Q4G0U5 840 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 GPR153Q6NV75 609 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 NDRG1Q92597 394 aaKnown RBP18.15■□□□□ 0.5
PTPRU-206ENST00000465525 C18orf8Q96DM3 657 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 KLHL5Q96PQ7 755 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 SLC4A5Q9BY07 1137 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 SALL4Q9UJQ4 1053 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 GUCA1BQ9UMX6 200 aa18.15■□□□□ 0.5
PTPRU-206ENST00000465525 HHLA1C9JL84 531 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 PJA2O43164 708 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 GPC5P78333 572 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 ADIGQ0VDE8 80 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 SMARCB1Q12824 385 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 KIF5AQ12840 1032 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms