RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 ECT2Q9H8V3 914 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 RCOR1Q9UKL0 485 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 DCHS1Q96JQ0 3298 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 PRR5-ARHGAP8B1AHC4 643 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 F8VP50 259 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 TRDMT1O14717 391 aaKnown RBP16.47■□□□□ 0.23
HOXB3-204ENST00000465120 RNF40O75150 1001 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 EGFP01133 1207 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 RETP07949 1114 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 DRD1P21728 446 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 ATICP31939 592 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 GJA4P35212 333 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 PXNP49023 591 aaPredicted RBP16.47■□□□□ 0.23
HOXB3-204ENST00000465120 USP46P62068 366 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 ARHGAP8P85298 464 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 LMNB2Q03252 620 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 ZNF77Q15935 545 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 BMT2Q1RMZ1 405 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 TDRD10Q5VZ19 366 aaKnown RBP16.47■□□□□ 0.23
HOXB3-204ENST00000465120 C12orf56Q8IXR9 622 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 CHFRQ96EP1 664 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 PAGE5Q96GU1 130 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
HOXB3-204ENST00000465120 CDV3Q9UKY7 258 aaKnown RBP16.47■□□□□ 0.23
HOXB3-204ENST00000465120 FAM163BP0C2L3 166 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 HOXC13P31276 330 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 STK4Q13043 487 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 ZNF699Q32M78 642 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 KMT5BQ4FZB7 885 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 PKN3Q6P5Z2 889 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 CD101Q93033 1021 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 SPATA32Q96LK8 384 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 C8orf48Q96LL4 319 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 CEP295NLQ96MC4 621 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 MED10Q9BTT4 135 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 ELOVL4Q9GZR5 314 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 LINC00597Q9H2U6 94 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 FBRSL1Q9HCM7 1045 aaKnown RBP16.46■□□□□ 0.23
HOXB3-204ENST00000465120 PARD6AQ9NPB6 346 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 DLL3Q9NYJ7 618 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 GCNT4Q9P109 453 aa16.46■□□□□ 0.23
HOXB3-204ENST00000465120 ATG2BQ96BY7 2078 aa16.46■□□□□ 0.22
HOXB3-204ENST00000465120 CLDN5O00501 218 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
HOXB3-204ENST00000465120 CCDC192P0DO97 292 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 PFKFB1P16118 471 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 AP3M2P53677 418 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 CDH8P55286 799 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 USP4Q13107 963 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 EML3Q32P44 896 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 NAIF1Q69YI7 327 aaPredicted RBP16.45■□□□□ 0.22
HOXB3-204ENST00000465120 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 WDR5BQ86VZ2 330 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 B3GALNT2Q8NCR0 500 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 ARHGAP26Q9UNA1 814 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 NME7Q9Y5B8 376 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
HOXB3-204ENST00000465120 LRRIQ3A6PVS8 624 aaPredicted RBP16.44■□□□□ 0.22
HOXB3-204ENST00000465120 LEFTY2O00292 366 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 KLRC4O43908 158 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 NFATC1O95644 943 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
HOXB3-204ENST00000465120 RAP1GAPP47736 663 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 PPP3CCP48454 512 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 NOP14P78316 857 aaKnown RBP16.44■□□□□ 0.22
HOXB3-204ENST00000465120 TAF10Q12962 218 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 NCOA4Q13772 614 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 FBXO43Q4G163 708 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 KIAA0895Q8NCT3 520 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 RPLP0P6Q8NHW5 317 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 PARD3BQ8TEW8 1205 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
HOXB3-204ENST00000465120 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 B3GNT5Q9BYG0 378 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
HOXB3-204ENST00000465120 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 SMPD4Q9NXE4 827 aa16.44■□□□□ 0.22
HOXB3-204ENST00000465120 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.44■□□□□ 0.22
HOXB3-204ENST00000465120 GREB1Q4ZG55 1949 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 ANAPC1Q9H1A4 1944 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 MED19A0JLT2 244 aaPredicted RBP16.43■□□□□ 0.22
HOXB3-204ENST00000465120 ZNF840PA6NDX5 716 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 AXIN1O15169 862 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 RPP40O75818 363 aaKnown RBP16.43■□□□□ 0.22
HOXB3-204ENST00000465120 P4HA1P13674 534 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 PFKLP17858 780 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 TGM1P22735 817 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 CMA1P23946 247 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 YWHAQP27348 245 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 HOXA6P31267 233 aa16.43■□□□□ 0.22
HOXB3-204ENST00000465120 ATXN1P54253 815 aaKnown RBP16.43■□□□□ 0.22
HOXB3-204ENST00000465120 CACNA2D1P54289 1103 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms