RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 EZH1Q92800 747 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CFAP36Q96G28 342 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 SRPK1Q96SB4 655 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 EBF4Q9BQW3 602 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 SHCBP1LQ9BZQ2 653 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 PHACTR1Q9C0D0 580 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 STRIP2Q9ULQ0 834 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CST3P01034 146 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 HSD17B4P51659 736 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 AQP5P55064 265 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 NPNTQ6UXI9 565 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 USP37Q86T82 979 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 PDIK1LQ8N165 341 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 EMC1Q8N766 993 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 APOPT1Q96IL0 206 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 MMP19Q99542 508 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 ECSITQ9BQ95 431 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
CLCNKA-204ENST00000464764 NFASCO94856 1347 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 STK10O94804 968 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 LYPLA2O95372 231 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 MAP3K6O95382 1288 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 INHBAP08476 426 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 LIG4P49917 911 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 RAP1GDS1P52306 607 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 HIRAP54198 1017 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 TMPRSS15P98073 1019 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 CDC16Q13042 620 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 CUL3Q13618 768 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 SLC5A9Q2M3M2 681 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 RNF111Q6ZNA4 994 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 TMPRSS6Q8IU80 811 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 WDTC1Q8N5D0 677 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 B4GALNT2Q8NHY0 566 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 SMYD3Q9H7B4 428 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 XPNPEP1Q9NQW7 623 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 BTAF1O14981 1849 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 IRF6O14896 467 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 SLC25A3Q00325 362 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 DSG1Q02413 1049 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 ZRSR2Q15696 482 aaKnown RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 LPCAT4Q643R3 524 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 POU5F2Q8N7G0 328 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 JOSD2Q8TAC2 188 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 VCPIP1Q96JH7 1222 aa13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-204ENST00000464764 COPEO14579 308 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 TGDSO95455 350 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 CHI3L2Q15782 390 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 RILPQ96NA2 401 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 TCRBV5S1A1TA0A578 114 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 A6NJR5 290 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 EXTL3O43909 919 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 WEE2P0C1S8 567 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 PDE1BQ01064 536 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 RALGPS1Q5JS13 557 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 GPAT2Q6NUI2 795 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SWSAP1Q6NVH7 229 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 CHSY1Q86X52 802 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 MYLK4Q86YV6 388 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 TMEM130Q8N3G9 435 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 TFAP2BQ92481 460 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 MTBPQ96DY7 904 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 NTPCRQ9BSD7 190 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SPATA16Q9BXB7 569 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 PDP2Q9P2J9 529 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 AGO2Q9UKV8 859 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 IQANK1A0A1B0GTG1 560 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 A8MXQ7 604 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 E7ESA3 106 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms