RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 DGKHQ86XP1 1220 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 SLC15A3Q8IY34 581 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 ATG4AQ8WYN0 398 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 REPS1Q96D71 796 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 FAM118BQ9BPY3 351 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 PRSS22Q9GZN4 317 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 TRMT13Q9NUP7 481 aaKnown RBP3.92□□□□□ -1.78
GARNL3-213ENST00000464616 ZSCAN32Q9NX65 697 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 TMX2Q9Y320 296 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 PLEKHM1Q9Y4G2 1056 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 WDR17Q8IZU2 1322 aa3.92□□□□□ -1.78
GARNL3-213ENST00000464616 POC1B-GALNT4F8VUJ3 575 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 PSMD9O00233 223 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 ZNF213O14771 459 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 DSCR3O14972 297 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 GCATO75600 419 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 UNC5CO95185 931 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 NHLRC4P0CG21 123 aaPredicted RBP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 XRCC6P12956 609 aaKnown RBP eCLIP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 SCP2P22307 547 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 TKTP29401 623 aaKnown RBP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 LRPAP1P30533 357 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 GNALP38405 381 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 TOB1P50616 345 aaPredicted RBP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 MAP2K6P52564 334 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 SOX8P57073 446 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 TCF15Q12870 199 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 IFIT1BQ5T764 474 aaKnown RBP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 DEPDC1Q5TB30 811 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 SRGAP1Q7Z6B7 1085 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 GALNT16Q8N428 558 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 GALNT4Q8N4A0 578 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 NANOGP1Q8N7R0 232 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 TTC8Q8TAM2 541 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 OSCP1Q8WVF1 389 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 SLC35A4Q96G79 324 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 CDK5RAP3Q96JB5 506 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 ZNF48Q96MX3 618 aaPredicted RBP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 MAP3K14Q99558 947 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 FSD1LQ9BXM9 530 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 ZNF700Q9H0M5 742 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 FAM204AQ9H8W3 233 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 TRNAU1APQ9NX07 287 aaKnown RBP3.91□□□□□ -1.78
GARNL3-213ENST00000464616 PI4KBQ9UBF8 816 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 PCDHA6Q9UN73 950 aa3.91□□□□□ -1.78
GARNL3-213ENST00000464616 RNF8O76064 485 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 PDE8BO95263 885 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 PRKCBP05771 671 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 CBSLP0DN79 551 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 IL1R2P27930 398 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 PCSK6P29122 969 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 CBSP35520 551 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 PDE6CP51160 858 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 PRKAG1P54619 331 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 OS9Q13438 667 aaPredicted RBP3.9□□□□□ -1.79
GARNL3-213ENST00000464616 LAMB3Q13751 1172 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 BOP1Q14137 746 aaKnown RBP3.9□□□□□ -1.79
GARNL3-213ENST00000464616 GBX1Q14549 363 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 ZNF268Q14587 947 aaPredicted RBP3.9□□□□□ -1.79
GARNL3-213ENST00000464616 LRRC41Q15345 812 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 MTHFD1LQ6UB35 978 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 Q6ZWC4 215 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 MRPL10Q7Z7H8 261 aaKnown RBP3.9□□□□□ -1.79
GARNL3-213ENST00000464616 TERB1Q8NA31 727 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 PDGFCQ9NRA1 345 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 CPA4Q9UI42 421 aa3.9□□□□□ -1.79
GARNL3-213ENST00000464616 NDRG4Q9ULP0 352 aaKnown RBP3.9□□□□□ -1.79
GARNL3-213ENST00000464616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.9□□□□□ -1.79
GARNL3-213ENST00000464616 CYP2D7A0A087X1C5 515 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 FAM227AF5H4B4 570 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 H7C1Q1 480 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 MYO1FO00160 1098 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 DCLK1O15075 740 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 CHRM5P08912 532 aaPredicted RBP3.89□□□□□ -1.79
GARNL3-213ENST00000464616 POU2F2P09086 479 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 CYP2C9P11712 490 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 PHKG2P15735 406 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 HDCP19113 662 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 VIPR2P41587 438 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 SP2Q02086 613 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 GPR162Q16538 588 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 MGAT5BQ3V5L5 792 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 CATIPQ7Z7H3 387 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 SIRT6Q8N6T7 355 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 TSR2Q969E8 191 aaKnown RBP3.89□□□□□ -1.79
GARNL3-213ENST00000464616 C1GALT1C1Q96EU7 318 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 CCDC17Q96LX7 622 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 FYTTD1Q96QD9 318 aaKnown RBP3.89□□□□□ -1.79
GARNL3-213ENST00000464616 MACROD1Q9BQ69 325 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 TMEM79Q9BSE2 394 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 WACQ9BTA9 647 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 CIPCQ9C0C6 399 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 SPRTNQ9H040 489 aaPredicted RBP3.89□□□□□ -1.79
GARNL3-213ENST00000464616 ARMT1Q9H993 441 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 XPR1Q9UBH6 696 aa3.89□□□□□ -1.79
GARNL3-213ENST00000464616 TMEM232C9JQI7 657 aa3.88□□□□□ -1.79
GARNL3-213ENST00000464616 H3BML4 177 aa3.88□□□□□ -1.79
GARNL3-213ENST00000464616 H3BNC9 293 aa3.88□□□□□ -1.79
GARNL3-213ENST00000464616 hCG_1984214I3L0E3 225 aa3.88□□□□□ -1.79
GARNL3-213ENST00000464616 AP4M1O00189 453 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms