RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCNFP41002 786 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ZNF132P52740 706 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 RPL7AP62424 266 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 ZNF200P98182 395 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 PLCB3Q01970 1234 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 GAD2Q05329 585 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 GRM2Q14416 872 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TAZQ16635 292 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 UGCGQ16739 394 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 LRRC23Q53EV4 343 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 XKR9Q5GH70 373 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 RASIP1Q5U651 963 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ATG16L1Q676U5 607 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PLA2G4FQ68DD2 849 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 DNAJC24Q6P3W2 148 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ALYREFQ86V81 257 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 LDHDQ86WU2 507 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TREML1Q86YW5 311 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 NME8Q8N427 588 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 RDM1Q8NG50 284 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 OPTNQ96CV9 577 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 NDNQ99608 321 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 KLF6Q99612 283 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 SIKE1Q9BRV8 207 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 FAM213AQ9BRX8 229 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 KIFC3Q9BVG8 833 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 MIS12Q9H081 205 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 C12orf65Q9H3J6 166 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 EPB41L1Q9H4G0 881 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ZWILCHQ9H900 591 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 GINM1Q9NU53 330 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ARMCX1Q9P291 453 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ATXN10Q9UBB4 475 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SLC7A8Q9UHI5 535 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TMCO1Q9UM00 188 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 IKBKGQ9Y6K9 419 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 SMCHD1A6NHR9 2005 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 ZNF646O15015 1829 aaPredicted RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 SMIM31A0A1B0GVY4 71 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 WDR64B1ANS9 1081 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 E5RJQ4 531 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 COPEO14579 308 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 HNRNPDLO14979 420 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 VNN1O95497 513 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 ENO1P06733 434 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 INHBAP08476 426 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 KRT76Q01546 638 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 OTUD4Q01804 1114 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 MAP3K10Q02779 954 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 FAAP100Q0VG06 881 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 DBN1Q16643 649 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 TBC1D25Q3MII6 688 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 BBS9Q3SYG4 887 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 HSF5Q4G112 596 aaPredicted RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 PABPC1LQ4VXU2 614 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 TEX44Q53QW1 395 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 TTC39BQ5VTQ0 682 aaPredicted RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 TDRD10Q5VZ19 366 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 TMEM270Q6UE05 265 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 PODNQ7Z5L7 613 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 PDSS2Q86YH6 399 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 UBR7Q8N806 425 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 IL31RAQ8NI17 732 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 PIP4K2CQ8TBX8 421 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 ACTL9Q8TC94 416 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 FAM172AQ8WUF8 416 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 BSNDQ8WZ55 320 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 KCNN1Q92952 543 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 HAUS1Q96CS2 278 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 MTBPQ96DY7 904 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 SRPK1Q96SB4 655 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 CCDC106Q9BWC9 280 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 ZNF518BQ9C0D4 1074 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 APOBEC3GQ9HC16 384 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 NDUFA13Q9P0J0 144 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 SIRPGQ9P1W8 387 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 PPARGC1AQ9UBK2 798 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 XPO7Q9UIA9 1087 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 HERC5Q9UII4 1024 aaKnown RBP7.62□□□□□ -1.19
USP48-206ENST00000464577 ZNF180Q9UJW8 692 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 SERPINA10Q9UK55 444 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 UBR3Q6ZT12 1888 aa7.62□□□□□ -1.19
USP48-206ENST00000464577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 A0A1B0GVG6 124 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 TCRBV9S1A1TA0A576 114 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 TMEM150BA6NC51 233 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 C2orf71A6NGG8 1288 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 F8VP50 259 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 G3V3G9 751 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ATP9BO43861 1147 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 RNASEH1O60930 286 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 SERPINA6P08185 405 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ZCCHC18P0CG32 403 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 PYGBP11216 843 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 AOC1P19801 751 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 CPA2P48052 419 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 GDF10P55107 478 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms