RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 DGKEP52429 567 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 TRIP6Q15654 476 aaKnown RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 L1TD1Q5T7N2 865 aaKnown RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 PXDC1Q5TGL8 231 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 FCRL6Q6DN72 434 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 KIRREL2Q6UWL6 708 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 SERPINA13PQ6UXR4 307 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 ZNF783Q6ZMS7 281 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 DAAM2Q86T65 1068 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 GAS2L3Q86XJ1 694 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 DENND1CQ8IV53 801 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 IZUMO1Q8IYV9 350 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 ABRAQ8N0Z2 381 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 SLC15A4Q8N697 577 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 DIS3LQ8TF46 1054 aaKnown RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 GPATCH3Q96I76 525 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 RITA1Q96K30 269 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 ZNF48Q96MX3 618 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 LENG8Q96PV6 779 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 P2RX7Q99572 595 aaKnown RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 SLC12A5Q9H2X9 1139 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 ANLNQ9NQW6 1124 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 ZSCAN32Q9NX65 697 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 STAP2Q9UGK3 403 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 NOP58Q9Y2X3 529 aaKnown RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 WDR17Q8IZU2 1322 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 A0A087WWL8 130 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 H3BML4 177 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 IKBKBO14920 756 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 USP1O94782 785 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 TOP3BO95985 862 aaKnown RBP5.16□□□□□ -1.58
ITGB1-208ENST00000464001 MYCLP12524 364 aaPredicted RBP5.16□□□□□ -1.58
ITGB1-208ENST00000464001 HSPA6P17066 643 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 SFPQP23246 707 aaKnown RBP eCLIP5.16□□□□□ -1.58
ITGB1-208ENST00000464001 ADORA2AP29274 412 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 ARHGAP25P42331 645 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 ZNF267Q14586 743 aaPredicted RBP5.16□□□□□ -1.58
ITGB1-208ENST00000464001 DAZAP2Q15038 168 aaPredicted RBP5.16□□□□□ -1.58
ITGB1-208ENST00000464001 CAND1Q86VP6 1230 aaKnown RBP5.16□□□□□ -1.58
ITGB1-208ENST00000464001 OR6B3Q8NGW1 331 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 KBTBD7Q8WVZ9 684 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 TMEM79Q9BSE2 394 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 CIPCQ9C0C6 399 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 VPS16Q9H269 839 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 ELOVL5Q9NYP7 299 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 FER1L4A9Z1Z3 1794 aa5.16□□□□□ -1.58
ITGB1-208ENST00000464001 A0A1W2PPL8 197 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 E2F8A0AVK6 867 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 PSMD9O00233 223 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 KCNA3P22001 575 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 HTR1BP28222 390 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 CCT4P50991 539 aaKnown RBP5.15□□□□□ -1.59
ITGB1-208ENST00000464001 RENBPP51606 427 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 PRKAG1P54619 331 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 ZIK1Q3SY52 487 aaPredicted RBP5.15□□□□□ -1.59
ITGB1-208ENST00000464001 SIRT6Q8N6T7 355 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 RSPRY1Q96DX4 576 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 AIFM3Q96NN9 605 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 FAM118BQ9BPY3 351 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 TRIM54Q9BYV2 358 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 NMRK2Q9NPI5 230 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 PDGFCQ9NRA1 345 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 SLC52A1Q9NWF4 448 aa5.15□□□□□ -1.59
ITGB1-208ENST00000464001 LOC102724159A0A0B4J2E5 919 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 AP4M1O00189 453 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 BTN3A1O00481 513 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 TBC1D4O60343 1298 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 BCAR3O75815 825 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 ALDH1L1O75891 902 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 UBXN7O94888 489 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 ARFIP2P53365 341 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 E2F1Q01094 437 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 CTBP1Q13363 440 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 LAMB3Q13751 1172 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 PWP2Q15269 919 aaKnown RBP5.14□□□□□ -1.59
ITGB1-208ENST00000464001 CYP1B1Q16678 543 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 PLA1AQ53H76 456 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 ADAMTS18Q8TE60 1221 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 PPP2R3CQ969Q6 453 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 HMCESQ96FZ2 354 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 FYTTD1Q96QD9 318 aaKnown RBP5.14□□□□□ -1.59
ITGB1-208ENST00000464001 MS4A7Q9GZW8 240 aaPredicted RBP5.14□□□□□ -1.59
ITGB1-208ENST00000464001 SPRTNQ9H040 489 aaPredicted RBP5.14□□□□□ -1.59
ITGB1-208ENST00000464001 TYW1Q9NV66 732 aaKnown RBP5.14□□□□□ -1.59
ITGB1-208ENST00000464001 GABBR1Q9UBS5 961 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 AMFRQ9UKV5 643 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 SNX14Q9Y5W7 946 aa5.14□□□□□ -1.59
ITGB1-208ENST00000464001 CYP2A6P11509 494 aaPredicted RBP5.13□□□□□ -1.59
ITGB1-208ENST00000464001 NPR1P16066 1061 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 IL1R2P27930 398 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 PIN1Q13526 163 aaPredicted RBP5.13□□□□□ -1.59
ITGB1-208ENST00000464001 RAB32Q13637 225 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 RABEP1Q15276 862 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 LY6KQ17RY6 165 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 RAB11FIP4Q86YS3 637 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 SPARTQ8N0X7 666 aa5.13□□□□□ -1.59
ITGB1-208ENST00000464001 MPP5Q8N3R9 675 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms