RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 H3BUI4 141 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 NMT2O60551 498 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 DNAJA2O60884 412 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 SRGAP2CP0DJJ0 459 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 SRGAP2BP0DMP2 458 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 HOXB1P14653 301 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 PEX2P28328 305 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 PRKCQQ04759 706 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 SMARCB1Q12824 385 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 ITGADQ13349 1161 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 LAPTM5Q13571 262 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 TRIP10Q15642 601 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 SLC15A2Q16348 729 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 KIAA1755Q5JYT7 1200 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 SCARA3Q6AZY7 606 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 ZDHHC24Q6UX98 284 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 TRMT10CQ7L0Y3 403 aaKnown RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 ADAMTSL2Q86TH1 951 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 BCL7CQ8WUZ0 217 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 TTC9Q92623 222 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 TRIM63Q969Q1 353 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 TRIM47Q96LD4 638 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 GCNAQ96QF7 691 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 VPS33BQ9H267 617 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 XPO7Q9UIA9 1087 aaKnown RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 APPL1Q9UKG1 709 aa7.4□□□□□ -1.22
CDKL5-203ENST00000463994 PA2G4Q9UQ80 394 aaKnown RBP7.4□□□□□ -1.22
CDKL5-203ENST00000463994 ADGRA3Q8IWK6 1321 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 A8MU76 341 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 GRM8O00222 908 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 CASQ2O14958 399 aaPredicted RBP7.4□□□□□ -1.23
CDKL5-203ENST00000463994 SNPHO15079 494 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 HOXC11O43248 304 aaPredicted RBP7.4□□□□□ -1.23
CDKL5-203ENST00000463994 ZW10O43264 779 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 PCNAP12004 261 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 RRM1P23921 792 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 KLRC1P26715 233 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 RPA1P27694 616 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 NUDT1P36639 197 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 PIK3CAP42336 1068 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 BTDP43251 543 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 MARSP56192 900 aaKnown RBP7.4□□□□□ -1.23
CDKL5-203ENST00000463994 DHX34Q14147 1143 aaKnown RBP7.4□□□□□ -1.23
CDKL5-203ENST00000463994 SPARCL1Q14515 664 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 DSC3Q14574 896 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 DGKDQ16760 1214 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 GRAMD1BQ3KR37 738 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 ARSHQ5FYA8 562 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 SH3BP5LQ7L8J4 393 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 KCTD20Q7Z5Y7 419 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 PRUNE1Q86TP1 453 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 GPR180Q86V85 440 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 NGDNQ8NEJ9 315 aaKnown RBP7.4□□□□□ -1.23
CDKL5-203ENST00000463994 TSPAN14Q8NG11 270 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 KBTBD7Q8WVZ9 684 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 CFAP36Q96G28 342 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 DSCC1Q9BVC3 393 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 HIPK3Q9H422 1215 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 SLCO1B3Q9NPD5 702 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 SEPT3Q9UH03 358 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 ARMCX3Q9UH62 379 aaPredicted RBP7.4□□□□□ -1.23
CDKL5-203ENST00000463994 RIMKLBQ9ULI2 386 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 PCDHA4Q9UN74 947 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 POLHQ9Y253 713 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 MAP3K2Q9Y2U5 619 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 DTNAQ9Y4J8 743 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 HEG1Q9ULI3 1381 aa7.4□□□□□ -1.23
CDKL5-203ENST00000463994 SLIT3O75094 1523 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 PFASO15067 1338 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 MYH11P35749 1972 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 PCP4L1A6NKN8 68 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 PSMD12O00232 456 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 TNPO2O14787 897 aaKnown RBP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 RHOBTB3O94955 611 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 DDX58O95786 925 aaKnown RBP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 PAHP00439 452 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 S100A6P06703 90 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 FGFR4P22455 802 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 KRT20P35900 424 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 BMXP51813 675 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 PTENP60484 403 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 FKBP4Q02790 459 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 ZBTB16Q05516 673 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 MAPRE2Q15555 327 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 DNAL1Q4LDG9 190 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 CLVS2Q5SYC1 327 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 LDLRAD1Q5T700 205 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 SHEQ5VZ18 495 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 KYAT3Q6YP21 454 aaKnown RBP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 EPM2AIP1Q7L775 607 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 ULK2Q8IYT8 1036 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 METTL13Q8N6R0 699 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 Q8N9G6 341 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-203ENST00000463994 RFWD2Q8NHY2 731 aa7.39□□□□□ -1.23
CDKL5-203ENST00000463994 YME1L1Q96TA2 773 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms