RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NPTXRO95502 500 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 PAEPP09466 180 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 CLTAP09496 248 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 NSFP46459 744 aaKnown RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ALDH7A1P49419 539 aaKnown RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF132P52740 706 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 CAMK1Q14012 370 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 SLMAPQ14BN4 828 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 LIN9Q5TKA1 542 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ATF7IP2Q5U623 682 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 KCTD16Q68DU8 428 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 TTC27Q6P3X3 843 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 HOOK3Q86VS8 718 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 CDR2LQ86X02 465 aaPredicted RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 BCAS4Q8TDM0 211 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 TLCD1Q96CP7 247 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 C18orf8Q96DM3 657 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 PI4K2AQ9BTU6 479 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 MRPL4Q9BYD3 311 aaKnown RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 EPN3Q9H201 632 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 MRPL47Q9HD33 250 aaKnown RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 PTPRHQ9HD43 1115 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ALG13Q9NP73 1137 aaKnown RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 HOMER3Q9NSC5 361 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 TBC1D13Q9NVG8 400 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 SLC12A6Q9UHW9 1150 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ANAPC7Q9UJX3 599 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 GGA2Q9UJY4 613 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 LZTS1Q9Y250 596 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 HES2Q9Y543 173 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 SCINQ9Y6U3 715 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ARL5CA6NH57 179 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 EBAG9O00559 213 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 FAM189A1O60320 539 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 FGF18O76093 207 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PROSCO94903 275 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 RARAP10276 462 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 LSP1P33241 339 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PPM1AP35813 382 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 RPL21P46778 160 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 AFF1P51825 1210 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PMS2P54278 862 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 WNT7BP56706 349 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 NOMO3P69849 1222 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 CCDC85BQ15834 202 aaPredicted RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 DCAF4L1Q3SXM0 396 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PLEKHA7Q6IQ23 1121 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 AADACL2Q6P093 401 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 B4GALNT4Q76KP1 1039 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 APBB1IPQ7Z5R6 666 aaPredicted RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 WDR49Q8IV35 697 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 GSTCDQ8NEC7 633 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 URGCPQ8TCY9 931 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 POF1BQ8WVV4 589 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ART4Q93070 314 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PGM2Q96G03 612 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 FAXDC2Q96IV6 333 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF558Q96NG5 402 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 TARS2Q9BW92 718 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 EPB41L4BQ9H329 900 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 NXF3Q9H4D5 531 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 NRDE2Q9H7Z3 1164 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 WHRNQ9P202 907 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 FEZ2Q9UHY8 353 aaPredicted RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 INPP5FQ9Y2H2 1132 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 RALGAPA2Q2PPJ7 1873 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PTPRJQ12913 1337 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 MYO1CO00159 1063 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 TOM1L1O75674 476 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 LSM8O95777 96 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ASS1P00966 412 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ALDH2P05091 517 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 GALTP07902 379 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 RARGP13631 454 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PROZP22891 400 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 AKAP5P24588 427 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 DNAJB1P25685 340 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ACOT2P49753 483 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 BCAR1P56945 870 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 CORO7P57737 925 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 NOP14P78316 857 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 CAV1Q03135 178 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 KRT17Q04695 432 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 RNASELQ05823 741 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 PDCLQ13371 301 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 TMEM132AQ24JP5 1023 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 EEF1DP3Q658K8 133 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ADAT2Q7Z6V5 191 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 ZNF280BQ86YH2 543 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 THNSL1Q8IYQ7 743 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 FBXO25Q8TCJ0 367 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 GRK7Q8WTQ7 553 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 CENPTQ96BT3 561 aa10.44□□□□□ -0.74
PTPRD-207ENST00000463477 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
PTPRD-207ENST00000463477 GAD1Q99259 594 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms