RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 HSPH1Q92598 858 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 C10orf88Q9H8K7 445 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 DNAJC17Q9NVM6 304 aaKnown RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 DDX56Q9NY93 547 aaKnown RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 LCMT1Q9UIC8 334 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 USP18Q9UMW8 372 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 TJP3O95049 919 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 TRUB2O95900 331 aaKnown RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 TFE3P19532 575 aaPredicted RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 GPD1P21695 349 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 KDELR1P24390 212 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ACAT1P24752 427 aaKnown RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 KLRC2P26717 231 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 CD52P31358 61 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ITGA8P53708 1063 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ATP11AP98196 1134 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 PPARDQ03181 441 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 CCDC14Q49A88 953 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 RHBDF2Q6PJF5 856 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 TMEM110Q86TL2 294 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 CCDC25Q86WR0 208 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ADGRF2Q8IZF7 708 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 SLC2A14Q8TDB8 520 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 PAAF1Q9BRP4 392 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 TMBIM4Q9HC24 238 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 PSD3Q9NYI0 1048 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ALDH1A1P00352 501 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 GHRP10912 638 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 PTPN7P35236 360 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 SP3Q02447 781 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 STILQ15468 1287 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 PTGISQ16647 500 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 ODF2Q5BJF6 829 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 FAM182AQ5T1J6 154 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 TTC19Q6DKK2 380 aaPredicted RBP13.45□□□□□ -0.26
VAPB-203ENST00000463370 AGMOQ6ZNB7 445 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 CRYBG2Q8N1P7 616 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 C3orf58Q8NDZ4 430 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 GRK7Q8WTQ7 553 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 SNF8Q96H20 258 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 PABPC3Q9H361 631 aaKnown RBP13.45□□□□□ -0.26
VAPB-203ENST00000463370 SNX25Q9H3E2 840 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 WHRNQ9P202 907 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 GAS8O95995 478 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 KRT7P08729 469 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 LRPAP1P30533 357 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 ADCY8P40145 1251 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 PNPLA4P41247 253 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 COPS2P61201 443 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 CALCOCO2Q13137 446 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 MMRN1Q13201 1228 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 NOGQ13253 232 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 BYSLQ13895 437 aaKnown RBP13.45□□□□□ -0.26
VAPB-203ENST00000463370 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
VAPB-203ENST00000463370 SV2CQ496J9 727 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 WSCD1Q658N2 575 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 RSPH3Q86UC2 560 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 ATP6V1G3Q96LB4 118 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 CNPY3Q9BT09 278 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 HOMER3Q9NSC5 361 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 PADI3Q9ULW8 664 aa13.45□□□□□ -0.26
VAPB-203ENST00000463370 ARL5CA6NH57 179 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CLDN5O00501 218 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 XPOTO43592 962 aaKnown RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 CST8O60676 142 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 HUS1O60921 280 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 ATF2P15336 505 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CAPN2P17655 700 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CETN2P41208 172 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 SCNN1GP51170 649 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CLCNKBP51801 687 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 SLC6A3Q01959 620 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 OASLQ15646 514 aaKnown RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 TAZQ16635 292 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 SYDE1Q6ZW31 735 aaPredicted RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 GSTA5Q7RTV2 222 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 ANKRD52Q8NB46 1076 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CMASQ8NFW8 434 aaPredicted RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 CAPNS2Q96L46 248 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 TMEM121Q9BTD3 319 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 ASNSD1Q9NWL6 643 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 TIMM13Q9Y5L4 95 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms