RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MIS12Q9H081 205 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 FAM107BQ9H098 131 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 RSAD1Q9HA92 442 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 CHST7Q9NS84 486 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 MIOSQ9NXC5 875 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 SNX24Q9Y343 169 aa15.23■□□□□ 0.03
HDAC6-213ENST00000462730 HUS1O60921 280 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 HSPA9P38646 679 aaKnown RBP15.22■□□□□ 0.03
HDAC6-213ENST00000462730 LILRA4P59901 499 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 KLF1Q13351 362 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ODF2Q5BJF6 829 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 LRRC8DQ7L1W4 858 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 LIMS2Q7Z4I7 341 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ADGRF2Q8IZF7 708 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ACSF2Q96CM8 615 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-213ENST00000462730 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 DDX56Q9NY93 547 aaKnown RBP15.22■□□□□ 0.03
HDAC6-213ENST00000462730 RSPH14Q9UHP6 348 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 R3HDM2Q9Y2K5 976 aaKnown RBP15.22■□□□□ 0.03
HDAC6-213ENST00000462730 PODXLO00592 558 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ECEL1O95672 775 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 CCDC130P13994 396 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 LMO2P25791 158 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ADORA2BP29275 332 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ALS2CLQ60I27 953 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 PMF1Q6P1K2 205 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 MFSD7Q6UXD7 560 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 OSTM1Q86WC4 334 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 TOP6BLQ8N6T0 577 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 DNAI2Q9GZS0 605 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-213ENST00000462730 YY1AP1Q9H869 796 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 ZWILCHQ9H900 591 aa15.22■□□□□ 0.03
HDAC6-213ENST00000462730 TDRD15B5MCY1 1934 aaKnown RBP15.21■□□□□ 0.03
HDAC6-213ENST00000462730 SHOX2O60902 331 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-213ENST00000462730 LRCH4O75427 683 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
HDAC6-213ENST00000462730 SLC25A11Q02978 314 aaKnown RBP15.21■□□□□ 0.03
HDAC6-213ENST00000462730 CFAP58Q5T655 872 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 KAZNQ674X7 775 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 SPOCD1Q6ZMY3 1216 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 CRYBG2Q8N1P7 616 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 ARFGAP1Q8N6T3 406 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 RAPGEF5Q92565 580 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 PGBD4Q96DM1 585 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 RUFY1Q96T51 708 aa15.21■□□□□ 0.03
HDAC6-213ENST00000462730 LRRD1A4D1F6 860 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 CYB561D2O14569 222 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 PQBP1O60828 265 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 POMCP01189 267 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 SKIP12755 728 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 KRT10P13645 584 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 SELPP16109 830 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 GPD1P21695 349 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 FLT3P36888 993 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 RPL21P46778 160 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 CLCNKBP51801 687 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 DRG2P55039 364 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 PPP1R7Q15435 360 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 HADHQ16836 314 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 POLNQ7Z5Q5 900 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 ECHDC2Q86YB7 292 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 FAM76AQ8TAV0 307 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 LINC01599Q8WXQ3 324 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 LRRC45Q96CN5 670 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 PIWIL1Q96J94 861 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 ZIM3Q96PE6 472 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 RGS18Q9NS28 235 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 TANC1Q9C0D5 1861 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 GOLGA6CA6NDK9 693 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 CASTOR2A6NHX0 329 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 KRT7P08729 469 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 GOLGA6DP0CG33 693 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 IL1R2P27930 398 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 BCAT1P54687 386 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 COPS2P61201 443 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 KRT17Q04695 432 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 BST2Q10589 180 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 BFSP2Q13515 415 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 SMTNL2Q2TAL5 461 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 ZNF598Q86UK7 904 aaKnown RBP15.2■□□□□ 0.02
HDAC6-213ENST00000462730 SLC35F5Q8WV83 523 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 SLCO2A1Q92959 643 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 FMO2Q99518 471 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 FAM118BQ9BPY3 351 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 HOMER3Q9NSC5 361 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 ZDHHC18Q9NUE0 388 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 ASNSD1Q9NWL6 643 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 GOLGA6AQ9NYA3 693 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 GRHL1Q9NZI5 618 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 INPP5FQ9Y2H2 1132 aa15.2■□□□□ 0.02
HDAC6-213ENST00000462730 hCG_1818297A0A087WSY0 165 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 GRAP2O75791 330 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 PTPN7P35236 360 aa15.19■□□□□ 0.02
HDAC6-213ENST00000462730 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-213ENST00000462730 ATN1P54259 1190 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms