RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 KCNK4Q9NYG8 393 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 IL1RAPL1Q9NZN1 696 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 DLGAP2Q9P1A6 1054 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SLC17A7Q9P2U7 560 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 STX18Q9P2W9 335 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 HEY2Q9UBP5 337 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SLC9A2Q9UBY0 812 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TAGLN3Q9UI15 199 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RABGEF1Q9UJ41 708 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ZNRF3Q9ULT6 936 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ZMYND8Q9ULU4 1186 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 POLIQ9UNA4 740 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FARP1Q9Y4F1 1045 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CCDC88AQ3V6T2 1871 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MYH8P13535 1937 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GREB1LQ9C091 1923 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KIF13BQ9NQT8 1826 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 LTBP1Q14766 1721 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CNTNAP1P78357 1384 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TCRBV5S1A1TA0A578 114 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 C3orf70A6NLC5 250 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 EIF4E1BA6NMX2 242 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TRIM49D1C9J1S8 452 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 KBTBD13C9JR72 458 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 H7C0C1 242 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 GOLGA8RI6L899 631 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 APOC4-APOC2K7ER74 178 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 K7ERI5 159 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CAPN9O14815 690 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CHADO15335 359 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF862O60290 1169 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CST8O60676 142 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 MAGEC1O60732 1142 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 BANF1O75531 89 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 RNF8O76064 485 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM63AO94886 807 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ASS1P00966 412 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 APOC2P02655 101 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 OATP04181 439 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CFHP08603 1231 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SNRPAP09012 282 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 WEE2P0C1S8 567 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DHRS4L1P0CG22 281 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 RARBP10826 455 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 MYL2P10916 166 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 KRT3P12035 628 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CD19P15391 556 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TCF4P15884 667 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TCF3P15923 654 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 KCNA2P16389 499 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DESP17661 470 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 BGNP21810 368 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 OSBPP22059 807 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SERPINB3P29508 390 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SSTR1P30872 391 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CDH5P33151 784 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ELK3P41970 407 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ATP5OP48047 213 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 GCLCP48506 637 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SERPINB9P50453 376 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 EFNA5P52803 228 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CACNA2D1P54289 1103 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ACTR2P61160 394 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 PSMC1P62191 440 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 RPL7AP62424 266 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TMPRSS15P98073 1019 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 OGDHQ02218 1023 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DSG1Q02413 1049 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SP4Q02446 784 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SLC25A11Q02978 314 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SLC18A2Q05940 514 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF252P-AS1Q0IIN9 211 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 FAAP100Q0VG06 881 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 THOC5Q13769 683 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 BAATQ14032 418 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TFDP2Q14188 446 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 PRKD1Q15139 912 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SURF1Q15526 300 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TAZQ16635 292 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DBN1Q16643 649 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DUOXA2Q1HG44 320 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF699Q32M78 642 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 KHDC1Q4VXA5 237 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 PPP1R15BQ5SWA1 713 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CYP4A22Q5TCH4 519 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 ANGEL2Q5VTE6 544 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DARS2Q6PI48 645 aaKnown RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 C4orf22Q6V702 233 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 DSTYKQ6XUX3 929 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SCARA5Q6ZMJ2 495 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 RINLQ6ZS11 566 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TAS1R3Q7RTX0 852 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 VSIG10LQ86VR7 867 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SESTD1Q86VW0 696 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 LRRC6Q86X45 466 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 TMPRSS6Q8IU80 811 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CRLF3Q8IUI8 442 aa3.67□□□□□ -1.82
COL8A1-204ENST00000462604 CDKL3Q8IVW4 592 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-204ENST00000462604 SCUBE1Q8IWY4 988 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms