RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 LHX5Q9H2C1 402 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 C12orf65Q9H3J6 166 aaKnown RBP7.74□□□□□ -1.17
SREBF2-204ENST00000462539 DENND2DQ9H6A0 471 aaPredicted RBP7.74□□□□□ -1.17
SREBF2-204ENST00000462539 C10orf88Q9H8K7 445 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
SREBF2-204ENST00000462539 ARL8BQ9NVJ2 186 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 ZFATQ9P243 1243 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 TJP2Q9UDY2 1190 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 CYTH4Q9UIA0 394 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 XPO7Q9UIA9 1087 aaKnown RBP7.74□□□□□ -1.17
SREBF2-204ENST00000462539 CPSF3Q9UKF6 684 aaKnown RBP7.74□□□□□ -1.17
SREBF2-204ENST00000462539 POLIQ9UNA4 740 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 CHMP2BQ9UQN3 213 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 TTLL3Q9Y4R7 772 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 LRRC42Q9Y546 428 aa7.74□□□□□ -1.17
SREBF2-204ENST00000462539 IQANK1A0A1B0GTG1 560 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 A6NHS1 94 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 APOC4-APOC2K7ER74 178 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MCF2LO15068 1137 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 OGTO15294 1046 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MED7O43513 233 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MSCO60682 206 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 LPXNO60711 386 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MAFO75444 373 aaPredicted RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SPAG6O75602 509 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TOM1L1O75674 476 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 FAM155BO75949 473 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TGDSO95455 350 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TRUB2O95900 331 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 APOC2P02655 101 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MT-ND3P03897 115 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ERBB2P04626 1255 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PRKCBP05771 671 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 CD48P09326 243 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 UBA1P22314 1058 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 CDC25CP30307 473 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 POLR2BP30876 1174 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 RFC1P35251 1148 aaPredicted RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 GCKP35557 465 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ELK3P41970 407 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ETV4P43268 484 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 RAP1GAPP47736 663 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 EFNA5P52803 228 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ARFIP2P53365 341 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 BACE1P56817 501 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PSMC1P62191 440 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PLCB3Q01970 1234 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ROR1Q01973 937 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 OVGP1Q12889 678 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 GRIK3Q13003 919 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 KRT72Q14CN4 511 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PRKD1Q15139 912 aaPredicted RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SEPT7Q16181 437 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 HADHQ16836 314 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SGSM1Q2NKQ1 1148 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TSNAXIP1Q2TAA8 658 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 CAPRIN2Q6IMN6 1127 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ANO7Q6IWH7 933 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 C4orf50Q6ZRC1 276 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SH2D5Q6ZV89 423 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ZBTB33Q86T24 672 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 XYLT1Q86Y38 959 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 IGDCC3Q8IVU1 814 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PALM2Q8IXS6 379 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PDIK1LQ8N165 341 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SLC44A1Q8WWI5 657 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PTPRN2Q92932 1015 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PRR11Q96HE9 360 aaPredicted RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 NSL1Q96IY1 281 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SERAC1Q96JX3 654 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PEBP4Q96S96 227 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 CYTH2Q99418 400 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 KLF6Q99612 283 aaPredicted RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ACO2Q99798 780 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 FAM167BQ9BTA0 163 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TUBB6Q9BUF5 446 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TRIM55Q9BYV6 548 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 BCO2Q9BYV7 579 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SDCBP2Q9H190 292 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 XYLT2Q9H1B5 865 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MANSC1Q9H8J5 431 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 KCNK13Q9HB14 408 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 AS3MTQ9HBK9 375 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PNPLA8Q9NP80 782 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ARHGEF4Q9NR80 690 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 CNTN3Q9P232 1028 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 WDR35Q9P2L0 1181 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 SAE1Q9UBE0 346 aaPredicted RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ZNF112Q9UJU3 913 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 DCTN4Q9UJW0 460 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 MTO1Q9Y2Z2 717 aaKnown RBP7.73□□□□□ -1.17
SREBF2-204ENST00000462539 PPME1Q9Y570 386 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 TEX264Q9Y6I9 313 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 CITO14578 2027 aa7.73□□□□□ -1.17
SREBF2-204ENST00000462539 ZNF638Q14966 1978 aaKnown RBP7.72□□□□□ -1.17
SREBF2-204ENST00000462539 TRIP11Q15643 1979 aa7.72□□□□□ -1.17
SREBF2-204ENST00000462539 TCRBV9S1A1TA0A576 114 aa7.72□□□□□ -1.17
SREBF2-204ENST00000462539 CCDC189A1A4V9 331 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms