RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 MUC3AQ02505 3323 aa12.35□□□□□ -0.43
TRAF3IP1-204ENST00000462122 A0A1W2PQC6 194 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 C2CD4DB7Z1M9 353 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 LOC730098B7Z3J9 87 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 O00370 1275 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 RTN3O95197 1032 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 GABRR2P28476 465 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 GBP2P32456 591 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 CCR2P41597 374 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 MAP3K7CLP57077 242 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 FANCCQ00597 558 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 RAPGEF1Q13905 1077 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 CNGA2Q16280 664 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 MEA1Q16626 185 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 SLC5A9Q2M3M2 681 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 ZDHHC14Q8IZN3 488 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 NUP93Q8N1F7 819 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 ZMIZ2Q8NF64 920 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 FGF13Q92913 245 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 UHRF1Q96T88 793 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 SMOQ99835 787 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 ZNF334Q9HCZ1 680 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 GDE1Q9NZC3 331 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 CDH7Q9ULB5 785 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 MAGED2Q9UNF1 606 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 PTPRDP23468 1912 aa12.34□□□□□ -0.43
TRAF3IP1-204ENST00000462122 A0A1W2PRU2 124 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 F8VZ95 297 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 MED7O43513 233 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 BEST1O76090 585 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TPM3P06753 285 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 LAMP2P13473 410 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 CEBPBP17676 345 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 GNA15P30679 374 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 USP8P40818 1118 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 PPP3CCP48454 512 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 KLK7P49862 253 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SLC5A3P53794 718 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 UBASH3AP57075 661 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 BPIFB4P59827 614 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 PTK2Q05397 1052 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 BST2Q10589 180 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 DRAP1Q14919 205 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 NR1I3Q14994 352 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 GAREM2Q75VX8 874 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TTC30AQ86WT1 665 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 NPAS3Q8IXF0 933 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 GJD3Q8N144 294 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 RNF214Q8ND24 703 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SHKBP1Q8TBC3 707 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TCEAL4Q96EI5 215 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 NAP1L5Q96NT1 182 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SLITRK1Q96PX8 696 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 MYADMQ96S97 322 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ATXN3LQ9H3M9 355 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 FBXO44Q9H4M3 255 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 AJAP1Q9UKB5 411 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAF3IP1-204ENST00000462122 FAM92AA1XBS5 289 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TNFRSF10BO14763 440 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TEX33O43247 280 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 MOSPD3O75425 235 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 F11P03951 625 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 BRD2P25440 801 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SSTR3P32745 418 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 USP46P62068 366 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TEAD2Q15562 447 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 STKLD1Q8NE28 680 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 ING5Q8WYH8 240 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 OVCA2Q8WZ82 227 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 TFAP2BQ92481 460 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 MRPS31Q92665 395 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SPAG5Q96R06 1193 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
TRAF3IP1-204ENST00000462122 IL37Q9NZH6 218 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms