RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 OTOL1A6NHN0 477 aaPredicted RBP20.18■□□□□ 0.82
VARS-220ENST00000461874 IKBKBO14920 756 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 CKMP06732 381 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 CXCL12P48061 93 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 CACNA2D1P54289 1103 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 NOP14P78316 857 aaKnown RBP20.18■□□□□ 0.82
VARS-220ENST00000461874 SATB1Q01826 763 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 CCINQ13939 588 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 KCNB1Q14721 858 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 PDGFRLQ15198 375 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 NFIL3Q16649 462 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 Q6ZS52 159 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 ARL14EPQ8N8R7 260 aaPredicted RBP20.18■□□□□ 0.82
VARS-220ENST00000461874 ELMO3Q96BJ8 720 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 ZNF518BQ9C0D4 1074 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 ELOVL4Q9GZR5 314 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 TMEM30AQ9NV96 361 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 TRPM5Q9NZQ8 1165 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 CLDN5O00501 218 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 MAPK13O15264 365 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 ARSAP15289 507 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 PFKLP17858 780 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 HDCP19113 662 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 RAP1GAPP47736 663 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 NRLP54845 237 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 MTF1Q14872 753 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 ZNF77Q15935 545 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 SGSM1Q2NKQ1 1148 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 C1orf220Q5T0J3 134 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 SV2AQ7L0J3 742 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 SYNPOQ8N3V7 929 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 RUBCNQ92622 972 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 CHFRQ96EP1 664 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 SDCBP2Q9H190 292 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 MAPK8IP1Q9UQF2 711 aa20.17■□□□□ 0.82
VARS-220ENST00000461874 ZNF840PA6NDX5 716 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 CLSTN1O94985 981 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 P4HA1P13674 534 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 TCF3P15923 654 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 NR2F2P24468 414 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 PPP3CCP48454 512 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 PDE6CP51160 858 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 USP4Q13107 963 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 SCARA5Q6ZMJ2 495 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 GUF1Q8N442 669 aaKnown RBP20.16■□□□□ 0.82
VARS-220ENST00000461874 OSCP1Q8WVF1 389 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 TAF4BQ92750 862 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 TNIP3Q96KP6 325 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 EPC1Q9H2F5 836 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 DUS2Q9NX74 493 aaKnown RBP20.16■□□□□ 0.82
VARS-220ENST00000461874 ARHGAP26Q9UNA1 814 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 OBSL1O75147 1896 aa20.16■□□□□ 0.82
VARS-220ENST00000461874 TRDMT1O14717 391 aaKnown RBP20.15■□□□□ 0.82
VARS-220ENST00000461874 AKAP3O75969 853 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 PAPSS2O95340 614 aaPredicted RBP20.15■□□□□ 0.82
VARS-220ENST00000461874 ASS1P00966 412 aaKnown RBP20.15■□□□□ 0.82
VARS-220ENST00000461874 VAMP7P51809 220 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 AMPD2Q01433 879 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 BECN1Q14457 450 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 TMEM196Q5HYL7 178 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 SH3RF2Q8TEC5 729 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 HINFPQ9BQA5 517 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 KIF26AQ9ULI4 1882 aaPredicted RBP20.15■□□□□ 0.82
VARS-220ENST00000461874 FRYLO94915 3013 aa20.15■□□□□ 0.82
VARS-220ENST00000461874 PTPRDP23468 1912 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 ATP8B3O60423 1300 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 RPL13P26373 211 aaKnown RBP20.14■□□□□ 0.81
VARS-220ENST00000461874 GRSF1Q12849 480 aaKnown RBP eCLIP20.14■□□□□ 0.81
VARS-220ENST00000461874 TAF10Q12962 218 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 FSTL4Q6MZW2 842 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 PAQR9Q6ZVX9 377 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 INTS8Q75QN2 995 aaKnown RBP20.14■□□□□ 0.81
VARS-220ENST00000461874 NUP93Q8N1F7 819 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 CPA6Q8N4T0 437 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 DCLK2Q8N568 766 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 TTC16Q8NEE8 873 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 CCDC34Q96HJ3 373 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 ECT2Q9H8V3 914 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 C2orf42Q9NWW7 574 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 WNT6Q9Y6F9 365 aa20.14■□□□□ 0.81
VARS-220ENST00000461874 ZNF638Q14966 1978 aaKnown RBP20.14■□□□□ 0.81
VARS-220ENST00000461874 K7ESF4 209 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 GJA4P35212 333 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 IFNAR2P48551 515 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 ZXDBP98169 803 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 ENPEPQ07075 957 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 ADAM9Q13443 819 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 EML3Q32P44 896 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 ZCWPW2Q504Y3 356 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 SPOPLQ6IQ16 392 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 ACOT1Q86TX2 421 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 FAM35AQ86V20 835 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 FAM186BQ8IYM0 893 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 FMR1NBQ8N0W7 255 aaPredicted RBP20.13■□□□□ 0.81
VARS-220ENST00000461874 ATP2A3Q93084 1043 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 SLITRK1Q96PX8 696 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 KCNK16Q96T55 309 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 MED10Q9BTT4 135 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 RNF38Q9H0F5 515 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms