RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SERPINF1P36955 418 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 NPTX2P47972 431 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 PDE6CP51160 858 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 PRKAG1P54619 331 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 LILRA4P59901 499 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 RNASE9P60153 205 aaKnown RBP3.57□□□□□ -1.84
HDAC6-212ENST00000461608 HSD11B2P80365 405 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 PPFIA1Q13136 1202 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF750Q32MQ0 723 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TUBB8Q3ZCM7 444 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 RABL3Q5HYI8 236 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.57□□□□□ -1.84
HDAC6-212ENST00000461608 SPDYAQ5MJ70 313 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 CACHD1Q5VU97 1274 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 ICE2Q659A1 982 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 SP5Q6BEB4 398 aaPredicted RBP3.57□□□□□ -1.84
HDAC6-212ENST00000461608 FCRL6Q6DN72 434 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TANGO2Q6ICL3 276 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 DPY19L2P1Q6NXN4 242 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TAF2Q6P1X5 1199 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 CCDC174Q6PII3 467 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 LDHAL6AQ6ZMR3 332 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 Q6ZRM9 215 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 SLC15A3Q8IY34 581 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 GALNT15Q8N3T1 639 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 GLIS1Q8NBF1 620 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 BPIFB1Q8TDL5 484 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 NEU1Q99519 415 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 KATNAL1Q9BW62 490 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.57□□□□□ -1.843e-20■■■■□ 19.4
HDAC6-212ENST00000461608 TRIM36Q9NQ86 728 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TMEM74BQ9NUR3 256 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TBC1D23Q9NUY8 699 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TRPM5Q9NZQ8 1165 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 LRFN1Q9P244 771 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 HSFX1Q9UBD0 423 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 DKK4Q9UBT3 224 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF69Q9UC07 566 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 ANAPC4Q9UJX5 808 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TESMINQ9Y4I5 508 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 XDHP47989 1333 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 A0A087X1B8 175 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 A0A0B4J269 797 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 H7C4K7 107 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 CD3EAPO15446 510 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 SRGAP2O75044 1071 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 VPS4BO75351 444 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 CDKL5O76039 1030 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 SCAF4O95104 1147 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF202O95125 648 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 NDST3O95803 873 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 NPPBP16860 134 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 BMPR1AP36894 532 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 MCM2P49736 904 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 MTHFSP49914 203 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 TOB1P50616 345 aaPredicted RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 RENBPP51606 427 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 ALDH18A1P54886 795 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 INHBCP55103 352 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 ARL4CP56559 192 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 CXADRP78310 365 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 DPTQ07507 201 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 GALNT1Q10472 559 aaPredicted RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 MYO1EQ12965 1108 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 GPS1Q13098 491 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 TUBB3Q13509 450 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 DYRK1AQ13627 763 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 CCNIQ14094 377 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 EFR3AQ14156 821 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 RRP1BQ14684 758 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 CLCA4Q14CN2 919 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 NPY5RQ15761 445 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 PDCD4Q53EL6 469 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 IGFL4Q6B9Z1 124 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 TMEM108Q6UXF1 575 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 SLC30A10Q6XR72 485 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 LRRC55Q6ZSA7 311 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 Q6ZSN1 163 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 KIAA0408Q6ZU52 694 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 SKAP1Q86WV1 359 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 TMPRSS6Q8IU80 811 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 CCDC28AQ8IWP9 274 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 ADGRG5Q8IZF4 528 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 FAM109AQ8N4B1 249 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 PAF1Q8N7H5 531 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 FUBP1Q96AE4 644 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 ADOQ96SZ5 270 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 TRIM5Q9C035 493 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 MAGEH1Q9H213 219 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 SLC25A32Q9H2D1 315 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 GALNT9Q9HCQ5 603 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 INTS13Q9NVM9 706 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 PARPBPQ9NWS1 579 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 DNAJB11Q9UBS4 358 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 HERC5Q9UII4 1024 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 NDRG4Q9ULP0 352 aaKnown RBP3.56□□□□□ -1.84
HDAC6-212ENST00000461608 SORCS3Q9UPU3 1222 aa3.56□□□□□ -1.84
HDAC6-212ENST00000461608 TRGV11A0A075B6L2 103 aa3.55□□□□□ -1.84
HDAC6-212ENST00000461608 A0A087WZ62 844 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms