RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 IRF2BP2Q7Z5L9 587 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 NOP9Q86U38 636 aaKnown RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 EPS8L1Q8TE68 723 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 SUSD6Q92537 303 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 SMG7Q92540 1137 aaKnown RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 PSMG2Q969U7 264 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 DMAP1Q9NPF5 467 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 NOCTQ9UK39 431 aaKnown RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 DENND4CQ5VZ89 1909 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 OBSL1O75147 1896 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 GABBR2O75899 941 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 CASP14P31944 242 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 EPHA5P54756 1037 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 BPIFB4P59827 614 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 USP46P62068 366 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 PDE4CQ08493 712 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 STILQ15468 1287 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 LEXMQ3ZCV2 418 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 DENND1BQ6P3S1 775 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 GPRIN1Q7Z2K8 1008 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-202ENST00000461433 TMC8Q8IU68 726 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 HS6ST3Q8IZP7 471 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 WDTC1Q8N5D0 677 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 CPLX3Q8WVH0 158 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 CEP295NLQ96MC4 621 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 UBXN6Q9BZV1 441 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF334Q9HCZ1 680 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-202ENST00000461433 IL37Q9NZH6 218 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 ASB3Q9Y575 518 aa11.93□□□□□ -0.5
SSBP1-202ENST00000461433 MBTPS2O43462 519 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 MED7O43513 233 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 XYLBO75191 536 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 PTPN2P17706 415 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 CHRNB2P17787 502 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 CCR2P41597 374 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 GPD2P43304 727 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 BCAT1P54687 386 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 NTHL1P78549 312 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 ZBED6P86452 979 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
SSBP1-202ENST00000461433 MEA1Q16626 185 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 SCAMP5Q8TAC9 235 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 OLIG1Q8TAK6 271 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 SLC20A1Q8WUM9 679 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 SECISBP2LQ93073 1101 aaKnown RBP11.92□□□□□ -0.5
SSBP1-202ENST00000461433 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF512Q96ME7 567 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-202ENST00000461433 CORO1BQ9BR76 489 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 SYT11Q9BT88 431 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 CYTH4Q9UIA0 394 aa11.92□□□□□ -0.5
SSBP1-202ENST00000461433 USP15Q9Y4E8 981 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-202ENST00000461433 ANAPC1Q9H1A4 1944 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 M0QYV0 167 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 XPO1O14980 1071 aaKnown RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ADCY5O95622 1261 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 RHOP08100 348 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 MMEP08473 750 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 CSH1P0DML2 217 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 CSH2P0DML3 217 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 FERP16591 822 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ANXA13P27216 316 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 RPL34P49207 117 aaKnown RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ARID5AQ03989 594 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 SMAD4Q13485 552 aaKnown RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 SLC5A9Q2M3M2 681 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 RAB41Q5JT25 222 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PRSS36Q5K4E3 855 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 CES5AQ6NT32 575 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PMF1Q6P1K2 205 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TMC6Q7Z403 805 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TMEM150AQ86TG1 271 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ITIH5Q86UX2 942 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PIGZQ86VD9 579 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 NUP93Q8N1F7 819 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TRMT2BQ96GJ1 504 aaKnown RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TTLL2Q9BWV7 592 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 LHX5Q9H2C1 402 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 GRPEL1Q9HAV7 217 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PIDD1Q9HB75 910 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 WDR6Q9NNW5 1121 aaKnown RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 AVENQ9NQS1 362 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 HESX1Q9UBX0 185 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms