RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 LIMS2Q7Z4I7 341 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 TMEM110Q86TL2 294 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 TTC13Q8NBP0 860 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 UHMK1Q8TAS1 419 aaKnown RBP21.23■□□□□ 0.99
CCM2-203ENST00000461377 STK32AQ8WU08 396 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 PEBP4Q96S96 227 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 FOXP3Q9BZS1 431 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 DPEP3Q9H4B8 488 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 HESX1Q9UBX0 185 aa21.23■□□□□ 0.99
CCM2-203ENST00000461377 A8MXQ7 604 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 KPNA7A9QM74 516 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 CST8O60676 142 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 CD48P09326 243 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 PDGFRAP16234 1089 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 SOX4Q06945 474 aaPredicted RBP21.22■□□□□ 0.99
CCM2-203ENST00000461377 TAF5Q15542 800 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 SKIDA1Q1XH10 827 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 CYP4V2Q6ZWL3 525 aaPredicted RBP21.22■□□□□ 0.99
CCM2-203ENST00000461377 FAM228AQ86W67 206 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 RELL1Q8IUW5 271 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 KCTD6Q8NC69 237 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 ARRDC4Q8NCT1 418 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 ROPN1BQ9BZX4 212 aaPredicted RBP21.22■□□□□ 0.99
CCM2-203ENST00000461377 ADAM7Q9H2U9 754 aa21.22■□□□□ 0.99
CCM2-203ENST00000461377 ROPN1Q9HAT0 212 aaPredicted RBP21.22■□□□□ 0.99
CCM2-203ENST00000461377 SRRM3A6NNA2 597 aaPredicted RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 TTC4O95801 387 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 C6orf222P0C671 652 aaPredicted RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 FGFR1P11362 822 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 ARSEP51690 589 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 GJA9P57773 515 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 OTUD4Q01804 1114 aaKnown RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 SREBF2Q12772 1141 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 SH3PXD2AQ5TCZ1 1133 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 CRYBG2Q8N1P7 616 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 ZCCHC9Q8N567 271 aaKnown RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 ACTL9Q8TC94 416 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 EPS8L3Q8TE67 593 aaKnown RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 HSPH1Q92598 858 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 PWWP2AQ96N64 755 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 MTG1Q9BT17 334 aaPredicted RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 TRIP12Q14669 1992 aaPredicted RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 TLDC2A0PJX2 215 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 RGS16O15492 202 aaPredicted RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 HCRTO43612 131 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 GABBR2O75899 941 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 ENDOD1O94919 500 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 AGTP01019 485 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 ZSCAN5DPP0CG00 497 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 CYBAP13498 195 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 TAF6P49848 677 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 DYNLT1P63172 113 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 SLC6A3Q01959 620 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 PDE4CQ08493 712 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 PTGISQ16647 500 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 SESTD1Q86VW0 696 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 BCAS4Q8TDM0 211 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 LPIN3Q9BQK8 851 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 PCDH9Q9HC56 1237 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 DNAJC17Q9NVM6 304 aaKnown RBP21.21■□□□□ 0.99
CCM2-203ENST00000461377 NINJ2Q9NZG7 142 aa21.21■□□□□ 0.99
CCM2-203ENST00000461377 RASGRF2O14827 1237 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 ACSL3O95573 720 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 ETS1P14921 441 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 SNX16P57768 344 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 MRPS6P82932 125 aaKnown RBP21.2■□□□□ 0.98
CCM2-203ENST00000461377 C15orf59Q2T9L4 293 aaPredicted RBP21.2■□□□□ 0.98
CCM2-203ENST00000461377 SV2CQ496J9 727 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 CCDC14Q49A88 953 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 TNFAIP8L3Q5GJ75 292 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 MFSD5Q6N075 450 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 CEP128Q6ZU80 1094 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 KHSRPQ92945 711 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCM2-203ENST00000461377 TMEM121Q9BTD3 319 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 GOLGA2P5Q9HBQ8 144 aa21.2■□□□□ 0.98
CCM2-203ENST00000461377 SMIM23A6NLE4 172 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 PAPSS1O43252 624 aaPredicted RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 GRAP2O75791 330 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 GNL1P36915 607 aaPredicted RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 PSMC4P43686 418 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 GPS1Q13098 491 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 AUHQ13825 339 aaKnown RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 RAB6CQ53S08 254 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 RFX6Q8HWS3 928 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 ZDHHC17Q8IUH5 632 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 RAB6CQ9H0N0 254 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 EPN3Q9H201 632 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 CNOT10Q9H9A5 744 aaKnown RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 RSAD1Q9HA92 442 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 GTF2IRD1Q9UHL9 959 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 TPX2Q9ULW0 747 aaKnown RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 DCAF8L1A6NGE4 600 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 PLCB3Q01970 1234 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 KYNUQ16719 465 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 TWF2Q6IBS0 349 aaKnown RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 ANKRD52Q8NB46 1076 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 UPF3AQ9H1J1 476 aaKnown RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 SNX25Q9H3E2 840 aa21.19■□□□□ 0.98
CCM2-203ENST00000461377 SAE1Q9UBE0 346 aaPredicted RBP21.19■□□□□ 0.98
CCM2-203ENST00000461377 TRPV2Q9Y5S1 764 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms