RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
RAB11FIP3-207ENST00000461009 SMYD3Q9H7B4 428 aa14.09□□□□□ -0.15
RAB11FIP3-207ENST00000461009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAB11FIP3-207ENST00000461009 OBP2AQ9NY56 170 aa14.09□□□□□ -0.15
RAB11FIP3-207ENST00000461009 UXTQ9UBK9 157 aaPredicted RBP14.09□□□□□ -0.15
RAB11FIP3-207ENST00000461009 FBXO4Q9UKT5 387 aa14.09□□□□□ -0.15
RAB11FIP3-207ENST00000461009 MYBPHLA2RUH7 354 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SOBPA7XYQ1 873 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SP9P0CG40 484 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 WEE1P30291 646 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 YWHAEP62258 255 aaKnown RBP14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PLCB2Q00722 1185 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 GAREM2Q75VX8 874 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 IER2Q9BTL4 223 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 C8orf33Q9H7E9 229 aaPredicted RBP14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TMLHEQ9NVH6 421 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NDRG2Q9UN36 371 aaKnown RBP14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MTF2Q9Y483 593 aaPredicted RBP14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PIAS3Q9Y6X2 628 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ATP8B3O60423 1300 aa14.08□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ATP2C2O75185 946 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 LMNAP02545 664 aaKnown RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ATF6P18850 670 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TBXAS1P24557 533 aaPredicted RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TARSP26639 723 aaKnown RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 AVPR1AP37288 418 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MAGEA11P43364 429 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ASPAP45381 313 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CYP27A1Q02318 531 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TYRO3Q06418 890 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 FCHO2Q0JRZ9 810 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ZNF528Q3MIS6 628 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CFAP221Q4G0U5 840 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 POTEHQ6S545 545 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 VSTM1Q6UX27 236 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 IRF2BP1Q8IU81 584 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CRYBG2Q8N1P7 616 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CELF5Q8N6W0 485 aaKnown RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 B3GALNT2Q8NCR0 500 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 EHBP1Q8NDI1 1231 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ATRIPQ8WXE1 791 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MRPS31Q92665 395 aaKnown RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TATDN2Q93075 761 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CLDN23Q96B33 292 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ELMO3Q96BJ8 720 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NT5C1BQ96P26 610 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 APOBEC3GQ9HC16 384 aaKnown RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CRTAC1Q9NQ79 661 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MAGED2Q9UNF1 606 aaPredicted RBP14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NFE2L3Q9Y4A8 694 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MIA3Q5JRA6 1907 aa14.07□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MYH10P35580 1976 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 LRRN2O75325 713 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TPM2P07951 284 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CYP2F1P24903 491 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 EEF1GP26641 437 aaKnown RBP14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ANXA13P27216 316 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CDR1P51861 262 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NDST1P52848 882 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CSTF1Q05048 431 aaKnown RBP14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 INCA1Q0VD86 236 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 LRRC32Q14392 662 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MAN2A1Q16706 1144 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 STXBP5Q5T5C0 1151 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SCN4BQ8IWT1 228 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ANKRD20A12PQ8NF67 263 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 BPIFB1Q8TDL5 484 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CEP295NLQ96MC4 621 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TUBGCP2Q9BSJ2 902 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NT5C1AQ9BXI3 368 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SDCBP2Q9H190 292 aa14.06□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CACNA1HO95180 2353 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 GTPBP10A4D1E9 387 aaKnown RBP14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 SMTNL1A8MU46 457 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 KCNJ18B7U540 433 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 TRIM66O15016 1216 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 HCRTO43612 131 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CD58P19256 250 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 BDNFP23560 247 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 GRIK1P39086 918 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 NRLP54845 237 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CYP4F8P98187 520 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 AMPD2Q01433 879 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CUL2Q13617 745 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 KCNJ12Q14500 433 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CC2D1AQ6P1N0 951 aaPredicted RBP14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 GBP6Q6ZN66 633 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 ACOT1Q86TX2 421 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 RALGPS2Q86X27 583 aaPredicted RBP14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 GPIHBP1Q8IV16 184 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 CMTM8Q8IZV2 173 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 MYLPFQ96A32 169 aa14.05□□□□□ -0.16
RAB11FIP3-207ENST00000461009 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms