RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TUBP50607 506 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 PNLIPRP1P54315 467 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 NPEPPSP55786 919 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 KCNAB1Q14722 419 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 FCRL6Q6DN72 434 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 GPATCH11Q8N954 259 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 CCDC89Q8N998 374 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 C1orf131Q8NDD1 294 aaKnown RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 HERVK_113Q902F9 699 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 DDX17Q92841 729 aaKnown RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 SCAMP4Q969E2 229 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 EID2BQ96D98 161 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 ZNF503Q96F45 646 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 CPEB1Q9BZB8 566 aaKnown RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 ENKD1Q9H0I2 346 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 IL23AQ9NPF7 189 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 PRDM8Q9NQV8 689 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 PARPBPQ9NWS1 579 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 HERC5Q9UII4 1024 aaKnown RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 TMEM98Q9Y2Y6 226 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 MTO1Q9Y2Z2 717 aaKnown RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 A6NLC8 198 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 B5MCH6 92 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 E9PLN8 166 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 PJA2O43164 708 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 STC2O76061 302 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 ACTL6BO94805 426 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 BAIAP3O94812 1187 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 INMTO95050 263 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 ANXA1P04083 346 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 NPPBP16860 134 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 TPH1P17752 444 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 MST1P26927 711 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 CST5P28325 142 aaPredicted RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 ATICP31939 592 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 ADD2P35612 726 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 PTDSS1P48651 473 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 PAPOLAP51003 745 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 PTTG1IPP53801 180 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 CLRN1P58418 232 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 TGFB2P61812 414 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 FSTL1Q12841 308 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 CUL4BQ13620 913 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 UBXN2BQ14CS0 331 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 FAM214AQ32MH5 1076 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 AMOTQ4VCS5 1084 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 PLA1AQ53H76 456 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 GPATCH4Q5T3I0 446 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 MZT2BQ6NZ67 158 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 CFAP161Q6P656 301 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 USP17L6PQ6QN14 398 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 FAM111BQ6SJ93 734 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 XYLT1Q86Y38 959 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 HERC6Q8IVU3 1022 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 CCDC117Q8IWD4 279 aaPredicted RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 PCYOX1LQ8NBM8 494 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 SLC17A8Q8NDX2 589 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 AFG1LQ8WV93 481 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 THAP4Q8WY91 577 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 MAELQ96JY0 434 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 VKORC1Q9BQB6 163 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 SPATA5L1Q9BVQ7 753 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 IMPG2Q9BZV3 1241 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 SIK2Q9H0K1 926 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 PABPC3Q9H361 631 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 EPS8L2Q9H6S3 715 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 WDR26Q9H7D7 661 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 AGO3Q9H9G7 860 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 SEPSECSQ9HD40 501 aaKnown RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 BLOC1S4Q9NUP1 217 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 LPAR3Q9UBY5 353 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 RGS17Q9UGC6 210 aaPredicted RBP3.4□□□□□ -1.87
HPS3-203ENST00000460822 SLC13A4Q9UKG4 626 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 ATP11BQ9Y2G3 1177 aa3.4□□□□□ -1.87
HPS3-203ENST00000460822 UBE2QL1A1L167 161 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 TCERG1O14776 1098 aaKnown RBP3.39□□□□□ -1.87
HPS3-203ENST00000460822 MFAP3LO75121 409 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 VPS4BO75351 444 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 FAM155BO75949 473 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 TBX18O95935 607 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 SLC6A2P23975 617 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 SEC24CP53992 1094 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 AP2B1P63010 937 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 MRPL49Q13405 166 aaKnown RBP3.39□□□□□ -1.87
HPS3-203ENST00000460822 ARHGEF7Q14155 803 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 FHL2Q14192 279 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 SLC5A9Q2M3M2 681 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 FAM160B1Q5W0V3 765 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 PLAG1Q6DJT9 500 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 MFSD5Q6N075 450 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 MRNIPQ6NTE8 343 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 PPP1R32Q7Z5V6 425 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 KCTD20Q7Z5Y7 419 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 PDPRQ8NCN5 879 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 SCAMP5Q8TAC9 235 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 TBC1D15Q8TC07 691 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 HTRA1Q92743 480 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 HDAC2Q92769 488 aaKnown RBP3.39□□□□□ -1.87
HPS3-203ENST00000460822 MIEF2Q96C03 454 aa3.39□□□□□ -1.87
HPS3-203ENST00000460822 KLHL32Q96NJ5 620 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms