RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 SMOQ99835 787 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 TMEM30AQ9NV96 361 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 MTMR10Q9NXD2 777 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 ARHGAP20Q9P2F6 1191 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 DPP7Q9UHL4 492 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 ZNF638Q14966 1978 aaKnown RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 TULP2O00295 520 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 XPO1O14980 1071 aaKnown RBP10.75□□□□□ -0.69
UPF2-204ENST00000460569 CCL16O15467 120 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 RFPL2O75678 378 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 ZMYND10O75800 440 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 LSM8O95777 96 aaKnown RBP10.75□□□□□ -0.69
UPF2-204ENST00000460569 GLP2RO95838 553 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
UPF2-204ENST00000460569 ATF6P18850 670 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 EIF4A3P38919 411 aaKnown RBP10.75□□□□□ -0.69
UPF2-204ENST00000460569 RGS7P49802 495 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 NOMO3P69849 1222 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 IFRD2Q12894 506 aaPredicted RBP10.75□□□□□ -0.69
UPF2-204ENST00000460569 KCNC3Q14003 757 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 VEPH1Q14D04 833 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 NAA35Q5VZE5 725 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 EP400NLQ6ZTU2 488 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 ELMOD1Q8N336 334 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 TMEM35BQ8NCS4 154 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 ZMIZ2Q8NF64 920 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 GIPC2Q8TF65 315 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 C8orf48Q96LL4 319 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 SYT11Q9BT88 431 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.75□□□□□ -0.69
UPF2-204ENST00000460569 LHX5Q9H2C1 402 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 DEF6Q9H4E7 631 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 CSNK1G1Q9HCP0 422 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 ST7Q9NRC1 585 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 CLDND1Q9NY35 253 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 C2orf16Q68DN1 1984 aa10.75□□□□□ -0.69
UPF2-204ENST00000460569 HOXA9P31269 272 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 GPD2P43304 727 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 PLA2G4AP47712 749 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 SLC5A3P53794 718 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 EPHB3P54753 998 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CDK17Q00537 523 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CCDC173Q0VFZ6 552 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 PDCLQ13371 301 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CCDC85BQ15834 202 aaPredicted RBP10.74□□□□□ -0.69
UPF2-204ENST00000460569 TAF12Q16514 161 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CLEC16AQ2KHT3 1053 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CYP26C1Q6V0L0 522 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 RTL10Q7L3V2 364 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 GPRIN1Q7Z2K8 1008 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 PIGZQ86VD9 579 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 OLIG1Q8TAK6 271 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 PDLIM2Q96JY6 352 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 NOX5Q96PH1 765 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 PCDHB18PQ96TA0 734 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CHP1Q99653 195 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 SFXN1Q9H9B4 322 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 LRRC4Q9HBW1 653 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 PNPLA8Q9NP80 782 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 ZDHHC7Q9NXF8 308 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 CYTH4Q9UIA0 394 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 OBSL1O75147 1896 aa10.74□□□□□ -0.69
UPF2-204ENST00000460569 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 SLC38A8A6NNN8 435 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 TMCO5BA8MYB1 307 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 HHLA1C9JL84 531 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 PIK3R2O00459 728 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 DDX3XO00571 662 aaKnown RBP eCLIP10.73□□□□□ -0.69
UPF2-204ENST00000460569 NCK2O43639 380 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 AKR1B10O60218 316 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 XYLBO75191 536 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 TBX10O75333 385 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 CYP1A1P04798 512 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
UPF2-204ENST00000460569 CSH1P0DML2 217 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 CSH2P0DML3 217 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 FECHP22830 423 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 CDH5P33151 784 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 NSFP46459 744 aaKnown RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 KIF11P52732 1056 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 ADIGQ0VDE8 80 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 ADAM15Q13444 863 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 MTMR3Q13615 1198 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 SKIV2LQ15477 1246 aaKnown RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 ANKRD54Q6NXT1 300 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 PMF1Q6P1K2 205 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 DENND5BQ6ZUT9 1274 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 ITIH5Q86UX2 942 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 NUP93Q8N1F7 819 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 SIX6OS1Q8N1H7 587 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 C12orf76Q8N812 135 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 MSANTD4Q8NCY6 345 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 SLC30A5Q8TAD4 765 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 IPO4Q8TEX9 1081 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms