RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RNF44Q7L0R7 432 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 BEND5Q7L4P6 421 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 KRT28Q7Z3Y7 464 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 SMC5Q8IY18 1101 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 YAF2Q8IY57 180 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 EXOC8Q8IYI6 725 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 FAM9AQ8IZU1 332 aaPredicted RBP4.1□□□□□ -1.75
RFC4-211ENST00000460408 SDR16C5Q8N3Y7 309 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 CYP2W1Q8TAV3 490 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 ZNF384Q8TF68 577 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 POF1BQ8WVV4 589 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 SNX19Q92543 992 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 TMEM125Q96AQ2 219 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 PPP1R9BQ96SB3 815 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 OSBPL9Q96SU4 736 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 CRB3Q9BUF7 120 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 TTLL2Q9BWV7 592 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 R3HDMLQ9H3Y0 253 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 PRDM13Q9H4Q3 707 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 GALNT9Q9HCQ5 603 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 DKK4Q9UBT3 224 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 ITGB1BP2Q9UKP3 347 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 SHOC2Q9UQ13 582 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 CDY1Q9Y6F8 540 aa4.1□□□□□ -1.75
RFC4-211ENST00000460408 A0A087WV62 115 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 F5H423 210 aaPredicted RBP4.09□□□□□ -1.75
RFC4-211ENST00000460408 H7C4K7 107 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 KCNQ3O43525 872 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 LPXNO60711 386 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 SPDEFO95238 335 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 NDUFA10O95299 355 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 HLA-DOAP06340 250 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 CSF1RP07333 972 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 MYL4P12829 197 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 KCNA3P22001 575 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 DDX6P26196 483 aaKnown RBP eCLIP4.09□□□□□ -1.75
RFC4-211ENST00000460408 GABRB3P28472 473 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 TRAPPC10P48553 1259 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 NDUFV1P49821 464 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 CPT1AP50416 773 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 DGKEP52429 567 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 FPGSQ05932 587 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 MYO1EQ12965 1108 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 ARHGEF7Q14155 803 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 SLC29A2Q14542 456 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 MGAT5BQ3V5L5 792 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 RBM20Q5T481 1227 aaKnown RBP4.09□□□□□ -1.75
RFC4-211ENST00000460408 VPS53Q5VIR6 699 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 RRAGBQ5VZM2 374 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 PAPD7Q5XG87 772 aaKnown RBP4.09□□□□□ -1.75
RFC4-211ENST00000460408 PLAG1Q6DJT9 500 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 RD3Q7Z3Z2 195 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.09□□□□□ -1.75
RFC4-211ENST00000460408 IPCEF1Q8WWN9 437 aaPredicted RBP4.09□□□□□ -1.75
RFC4-211ENST00000460408 C18orf8Q96DM3 657 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 RNF31Q96EP0 1072 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 TMEM41AQ96HV5 264 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 PTDSS2Q9BVG9 487 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 STK33Q9BYT3 514 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 SERHL2Q9H4I8 314 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 CXorf36Q9H7Y0 433 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 HDAC9Q9UKV0 1011 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 SSX2IPQ9Y2D8 614 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 MAN2B2Q9Y2E5 1009 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 NOX1Q9Y5S8 564 aa4.09□□□□□ -1.75
RFC4-211ENST00000460408 ARID4BQ4LE39 1312 aaPredicted RBP4.09□□□□□ -1.75
RFC4-211ENST00000460408 A0A0B4J269 797 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 LOC102724159A0A0B4J2E5 919 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 hCG_1984214I3L0E3 225 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 RAB27BO00194 218 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 ADAMTS3O15072 1205 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 RRP9O43818 475 aaKnown RBP4.08□□□□□ -1.76
RFC4-211ENST00000460408 TCEA3O75764 348 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 INMTO95050 263 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 NDST3O95803 873 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 ERBB2P04626 1255 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 ITGB6P18564 788 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 PTDSS1P48651 473 aaKnown RBP4.08□□□□□ -1.76
RFC4-211ENST00000460408 MAPK10P53779 464 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 TNFAIP2Q03169 654 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 TUBB3Q13509 450 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 TP53BP2Q13625 1128 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 PWP2Q15269 919 aaKnown RBP4.08□□□□□ -1.76
RFC4-211ENST00000460408 INSCQ1MX18 579 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 ZNF750Q32MQ0 723 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 GRAMD1BQ3KR37 738 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 SPDYE7PQ495Y7 208 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 PREPLQ4J6C6 727 aaPredicted RBP4.08□□□□□ -1.76
RFC4-211ENST00000460408 LAYNQ6UX15 382 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 KIAA0408Q6ZU52 694 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 KCTD20Q7Z5Y7 419 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 GPR149Q86SP6 731 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 ARHGEF19Q8IW93 802 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 COLGALT2Q8IYK4 626 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 TXLNBQ8N3L3 684 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 BPIFB1Q8TDL5 484 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 ZNF566Q969W8 418 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 LRRC46Q96FV0 321 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 CHMP4AQ9BY43 222 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 EIF2AQ9BY44 585 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms