RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 F8VP50 259 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 P4HA2O15460 535 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 F11P03951 625 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 PSMC3P17980 439 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 CD58P19256 250 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 WEE1P30291 646 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 AVPR1AP37288 418 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 FMO5P49326 533 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 YWHAEP62258 255 aaKnown RBP15.87■□□□□ 0.13
ATG4B-213ENST00000460211 CYP4F8P98187 520 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 CREBRFQ8IUR6 639 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 SMARCD1Q96GM5 515 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 ZNF518BQ9C0D4 1074 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 BRD9Q9H8M2 597 aa15.87■□□□□ 0.13
ATG4B-213ENST00000460211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.87■□□□□ 0.13
ATG4B-213ENST00000460211 EP300Q09472 2414 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-213ENST00000460211 HEPACAM2A8MVW5 462 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 CLDN5O00501 218 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 NRG2O14511 850 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-213ENST00000460211 ZNF263O14978 683 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 PMM2O15305 246 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 FCARP24071 287 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 VIPR2P41587 438 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 PPP3CCP48454 512 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 PDE6CP51160 858 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 STXBP5Q5T5C0 1151 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 POTEHQ6S545 545 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 FAM35AQ86V20 835 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 MFSD6LQ8IWD5 586 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 IRF7Q92985 503 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 SLC46A2Q9BY10 475 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 PLA2G2FQ9BZM2 168 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 DMAP1Q9NPF5 467 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-213ENST00000460211 ARHGEF3Q9NR81 526 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 OBP2AQ9NY56 170 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 TRPM5Q9NZQ8 1165 aa15.86■□□□□ 0.13
ATG4B-213ENST00000460211 CACNA1AO00555 2505 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 MED19A0JLT2 244 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 CILPO75339 1184 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 AP1G2O75843 785 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 RTN3O95197 1032 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 MBD3O95983 291 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 TBXAS1P24557 533 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 MARSP56192 900 aaKnown RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 GRM2Q14416 872 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 SLC44A4Q53GD3 710 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 CT47A1Q5JQC4 288 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 VITQ6UXI7 678 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 MON1AQ86VX9 555 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 TRIM59Q8IWR1 403 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 CMTM8Q8IZV2 173 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 NUP93Q8N1F7 819 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 CELF5Q8N6W0 485 aaKnown RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 MAB21L3Q8N8X9 362 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 STKLD1Q8NE28 680 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 SLC2A14Q8TDB8 520 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 TATDN2Q93075 761 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 HEXIM2Q96MH2 286 aaKnown RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 SLITRK1Q96PX8 696 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 CISHQ9NSE2 258 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 THG1LQ9NWX6 298 aaKnown RBP15.85■□□□□ 0.13
ATG4B-213ENST00000460211 SIT1Q9Y3P8 196 aa15.85■□□□□ 0.13
ATG4B-213ENST00000460211 TRAV19A0A0A6YYK7 116 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 LRRN2O75325 713 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 AFPP02771 609 aaKnown RBP15.84■□□□□ 0.13
ATG4B-213ENST00000460211 FAM200BP0CF97 657 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 PFKLP17858 780 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 YWHAQP27348 245 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 ERCC5P28715 1186 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-213ENST00000460211 GDI1P31150 447 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 PRKCQQ04759 706 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 KCNH2Q12809 1159 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 ORC1Q13415 861 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 CUL2Q13617 745 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 TXNDC8Q6A555 127 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 PHLDB3Q6NSJ2 640 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 DGLUCYQ7Z3D6 616 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 TMEM150AQ86TG1 271 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 FAM114A1Q8IWE2 563 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 FUKQ8N0W3 1084 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 DCLK2Q8N568 766 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 C12orf29Q8N999 325 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 DNASE1L2Q92874 299 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 CYFIP2Q96F07 1278 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 NT5C1BQ96P26 610 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 HNRNPABQ99729 332 aaKnown RBP15.84■□□□□ 0.13
ATG4B-213ENST00000460211 TTLL2Q9BWV7 592 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 FOXQ1Q9C009 403 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 SEMA4AQ9H3S1 761 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 KIF9Q9HAQ2 790 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 TRPC7Q9HCX4 862 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 KRT82Q9NSB4 513 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 FAM49BQ9NUQ9 324 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 COMMD8Q9NX08 183 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 HMGXB4Q9UGU5 601 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 DNAH14Q0VDD8 3507 aa15.84■□□□□ 0.13
ATG4B-213ENST00000460211 COL4A3Q01955 1670 aa15.83■□□□□ 0.13
ATG4B-213ENST00000460211 CHADO15335 359 aa15.83■□□□□ 0.12
ATG4B-213ENST00000460211 USP17L7P0C7H9 530 aa15.83■□□□□ 0.12
ATG4B-213ENST00000460211 SP9P0CG40 484 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms