RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 THEM5Q8N1Q8 247 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 DTWD2Q8NBA8 298 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 DDX1Q92499 740 aaKnown RBP13.52□□□□□ -0.25
C4A-244ENST00000460060 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 HEXIM2Q96MH2 286 aaKnown RBP13.52□□□□□ -0.25
C4A-244ENST00000460060 EIF3CQ99613 913 aaKnown RBP13.52□□□□□ -0.25
C4A-244ENST00000460060 EMILIN2Q9BXX0 1053 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.25
C4A-244ENST00000460060 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 STK39Q9UEW8 545 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 NME7Q9Y5B8 376 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 MYO15AQ9UKN7 3530 aa13.52□□□□□ -0.25
C4A-244ENST00000460060 DDX3XO00571 662 aaKnown RBP eCLIP13.51□□□□□ -0.25
C4A-244ENST00000460060 MED7O43513 233 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 LCA5LO95447 670 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 FGFR3P22607 806 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 BRD2P25440 801 aaKnown RBP13.51□□□□□ -0.25
C4A-244ENST00000460060 PCSK1P29120 753 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 KIF11P52732 1056 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 SLC18A3Q16572 532 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 OVOS1Q6IE37 1185 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.51□□□□□ -0.25
C4A-244ENST00000460060 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 SIX5Q8N196 739 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 CMASQ8NFW8 434 aaPredicted RBP13.51□□□□□ -0.25
C4A-244ENST00000460060 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 LNX1Q8TBB1 728 aaPredicted RBP13.51□□□□□ -0.25
C4A-244ENST00000460060 ZNF606Q8WXB4 792 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 GPR62Q9BZJ7 368 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 ADAMTS1Q9UHI8 967 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 FBXL21Q9UKT6 434 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 CACNA1IQ9P0X4 2223 aa13.51□□□□□ -0.25
C4A-244ENST00000460060 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
C4A-244ENST00000460060 A0A087X0T9 212 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 HCRTO43612 131 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 OAZ2O95190 189 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 EFEMP2O95967 443 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 MMEP08473 750 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 FAM228BP0C875 321 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 PTPN1P18031 435 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 ACAT1P24752 427 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 TKTP29401 623 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 FMO1Q01740 532 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 YWHAHQ04917 246 aaPredicted RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 GFPT1Q06210 699 aaPredicted RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 SPA17Q15506 151 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 CNGA2Q16280 664 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 TRIM72Q6ZMU5 477 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 TOGARAM2Q6ZUX3 1019 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 TFAP2BQ92481 460 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 PCDHB18PQ96TA0 734 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 ZSWIM1Q9BR11 485 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 ACBD6Q9BR61 282 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 DPEP3Q9H4B8 488 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 MRPL17Q9NRX2 175 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 SPTLC3Q9NUV7 552 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 SEPT11Q9NVA2 429 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 WNT16Q9UBV4 365 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 CDH9Q9ULB4 789 aa13.5□□□□□ -0.25
C4A-244ENST00000460060 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
C4A-244ENST00000460060 DOCK6Q96HP0 2047 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 O00370 1275 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 NARSO43776 548 aaKnown RBP13.49□□□□□ -0.25
C4A-244ENST00000460060 KRT83P78385 493 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 STILQ15468 1287 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
C4A-244ENST00000460060 CCDC122Q5T0U0 273 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 ARHGAP17Q68EM7 881 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 OLIG1Q8TAK6 271 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 DESI2Q9BSY9 194 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 SEMA4AQ9H3S1 761 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 WDR6Q9NNW5 1121 aaKnown RBP13.49□□□□□ -0.25
C4A-244ENST00000460060 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 PCDHGC3Q9UN70 934 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 ADGRG1Q9Y653 693 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 CACNA1AO00555 2505 aa13.49□□□□□ -0.25
C4A-244ENST00000460060 FANCMQ8IYD8 2048 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 CCDC195A0A1B0GUA6 201 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 KRBA1A5PL33 1030 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 H7C4K7 107 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 ZNF263O14978 683 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 ATP2C2O75185 946 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 LSM8O95777 96 aaKnown RBP13.48□□□□□ -0.25
C4A-244ENST00000460060 SOD2P04179 222 aa13.48□□□□□ -0.25
C4A-244ENST00000460060 CYP1A1P04798 512 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms