RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 CCR3P51677 355 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 CACNA2D1P54289 1103 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 NOP14P78316 857 aaKnown RBP22.24■■□□□ 1.15
SRM-202ENST00000459997 MTF1Q14872 753 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 NFIL3Q16649 462 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 SGSM1Q2NKQ1 1148 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 DGKKQ5KSL6 1271 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 MAMSTRQ6ZN01 415 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 SV2AQ7L0J3 742 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 ZBTB44Q8NCP5 570 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 NELL1Q92832 810 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 TTLL2Q9BWV7 592 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 SDCBP2Q9H190 292 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 TMEM30AQ9NV96 361 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 TRPM5Q9NZQ8 1165 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 GCNT4Q9P109 453 aa22.24■■□□□ 1.15
SRM-202ENST00000459997 IKBKBO14920 756 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 MAPK13O15264 365 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 P4HA1P13674 534 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 ARSAP15289 507 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 HDCP19113 662 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 PIK3CAP42336 1068 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 VAMP7P51809 220 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 NUCB2P80303 420 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 GAS6Q14393 721 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 PDGFRLQ15198 375 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 ZNF77Q15935 545 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 C1orf220Q5T0J3 134 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 Q6ZS52 159 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 TNIP3Q96KP6 325 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 FAM126AQ9BYI3 521 aaPredicted RBP22.23■■□□□ 1.15
SRM-202ENST00000459997 FRYLO94915 3013 aa22.23■■□□□ 1.15
SRM-202ENST00000459997 RIF1Q5UIP0 2472 aaKnown RBP22.23■■□□□ 1.15
SRM-202ENST00000459997 HELZP42694 1942 aaKnown RBP22.22■■□□□ 1.15
SRM-202ENST00000459997 GOLGA6L4A6NEF3 574 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 OTOL1A6NHN0 477 aaPredicted RBP22.22■■□□□ 1.15
SRM-202ENST00000459997 AKAP3O75969 853 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 TDGF1P13385 188 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 RPL13P26373 211 aaKnown RBP22.22■■□□□ 1.15
SRM-202ENST00000459997 CXCL12P48061 93 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 PDE6CP51160 858 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 SATB1Q01826 763 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 USP4Q13107 963 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 CCINQ13939 588 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 INTS8Q75QN2 995 aaKnown RBP22.22■■□□□ 1.15
SRM-202ENST00000459997 FAM186BQ8IYM0 893 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 SPEM1Q8N4L4 309 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 SUMF1Q8NBK3 374 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 TAF4BQ92750 862 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 HINFPQ9BQA5 517 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 MED10Q9BTT4 135 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 ATP8B3O60423 1300 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 ZNF292O60281 2723 aa22.22■■□□□ 1.15
SRM-202ENST00000459997 ASS1P00966 412 aaKnown RBP22.21■■□□□ 1.15
SRM-202ENST00000459997 HLA-DRAP01903 254 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 TRIM49P0CI25 452 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 TRIM49CP0CI26 452 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 KRT13P13646 458 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 NRLP54845 237 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 IFRD2Q12894 506 aaPredicted RBP22.21■■□□□ 1.15
SRM-202ENST00000459997 PNOCQ13519 176 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 SPOPLQ6IQ16 392 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 FAM35AQ86V20 835 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 SMYD4Q8IYR2 804 aaPredicted RBP22.21■■□□□ 1.15
SRM-202ENST00000459997 FMR1NBQ8N0W7 255 aaPredicted RBP22.21■■□□□ 1.15
SRM-202ENST00000459997 SH3RF2Q8TEC5 729 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 OSCP1Q8WVF1 389 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 DUS2Q9NX74 493 aaKnown RBP22.21■■□□□ 1.15
SRM-202ENST00000459997 ARHGAP26Q9UNA1 814 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 WNT6Q9Y6F9 365 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 FAM186AA6NE01 2351 aa22.21■■□□□ 1.15
SRM-202ENST00000459997 ZNF840PA6NDX5 716 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 LILRB5O75023 590 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 ABL1P00519 1130 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 PSMC2P35998 433 aaKnown RBP22.2■■□□□ 1.14
SRM-202ENST00000459997 PPP3CCP48454 512 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 GCLMP48507 274 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 IFNAR2P48551 515 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 TAF10Q12962 218 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 ADAM9Q13443 819 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 ZCWPW2Q504Y3 356 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 ACOT1Q86TX2 421 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 CPA6Q8N4T0 437 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 RUBCNQ92622 972 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 CHFRQ96EP1 664 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 SLITRK1Q96PX8 696 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 KCNK16Q96T55 309 aa22.2■■□□□ 1.14
SRM-202ENST00000459997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.2■■□□□ 1.148e-10■■■■■ 41.5
SRM-202ENST00000459997 PFKLP17858 780 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 ASPAP45381 313 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 NDST1P52848 882 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 AMPD2Q01433 879 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 ORC1Q13415 861 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 NUP93Q8N1F7 819 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 SYNPOQ8N3V7 929 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 ATP2A3Q93084 1043 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 SMARCD1Q96GM5 515 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 IMPG2Q9BZV3 1241 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 MMRN2Q9H8L6 949 aa22.19■■□□□ 1.14
SRM-202ENST00000459997 RMND1Q9NWS8 449 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms