RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 UROC1Q96N76 676 aa11.15□□□□□ -0.62
AMBRA1-202ENST00000458649 UBXN6Q9BZV1 441 aa11.15□□□□□ -0.62
AMBRA1-202ENST00000458649 ASB7Q9H672 318 aa11.15□□□□□ -0.62
AMBRA1-202ENST00000458649 CYP4F11Q9HBI6 524 aa11.15□□□□□ -0.62
AMBRA1-202ENST00000458649 AFF4Q9UHB7 1163 aaKnown RBP11.15□□□□□ -0.62
AMBRA1-202ENST00000458649 TRIM33Q9UPN9 1127 aa11.15□□□□□ -0.62
AMBRA1-202ENST00000458649 A0A087WZ62 844 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 ANXA9O76027 345 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 HAUS5O94927 633 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 ASS1P00966 412 aaKnown RBP11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 CUL2Q13617 745 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 COL9A3Q14050 684 aaPredicted RBP11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 PABPC1LQ4VXU2 614 aaKnown RBP11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 TIGD7Q6NT04 549 aaPredicted RBP11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 COG1Q8WTW3 980 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 RUBCNQ92622 972 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 FDXACB1Q9BRP7 624 aaPredicted RBP11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 LRRC1Q9BTT6 524 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 NDEL1Q9GZM8 345 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 STMN3Q9NZ72 180 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 PDP2Q9P2J9 529 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 STK39Q9UEW8 545 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 ZFP69BQ9UJL9 534 aa11.15□□□□□ -0.63
AMBRA1-202ENST00000458649 GHRP10912 638 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ACO1P21399 889 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 LAMTOR4Q0VGL1 99 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 FLOT2Q14254 428 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 SPARCL1Q14515 664 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 TTLL9Q3SXZ7 439 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 FBXO47Q5MNV8 452 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 OVOS1Q6IE37 1185 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 CCDC137Q6PK04 289 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ARHGAP22Q7Z5H3 698 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 LINC00523Q86TU6 105 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 DNAJB3Q8WWF6 145 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 DNAJC9Q8WXX5 260 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM129AQ9BZQ8 928 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 CHST12Q9NRB3 414 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 GID8Q9NWU2 228 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ZFATQ9P243 1243 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM237AA0A1B0GTK4 181 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 PRPF4O43172 522 aaKnown RBP eCLIP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ADCY6O43306 1168 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 CAND2O75155 1236 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 NPTX2P47972 431 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 NAPEPLDQ6IQ20 393 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 OTUB1Q96FW1 271 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 DCLK3Q9C098 648 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 WDCPQ9H6R7 721 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 RAB23Q9ULC3 237 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 MYL4P12829 197 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 POU5F1BQ06416 359 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 AARS2Q5JTZ9 985 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 RGS9BPQ6ZS82 235 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 FLCNQ8NFG4 579 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ATL2Q8NHH9 583 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 CACNA1FO60840 1977 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 E7ENQ6 273 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 SERPINB1P30740 379 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 GLRA4Q5JXX5 417 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ZNF483Q8TF39 744 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 ARHGEF26Q96DR7 871 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 SGSM3Q96HU1 749 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 DDIT4Q9NX09 232 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 NDUFA13Q9P0J0 144 aa11.14□□□□□ -0.63
AMBRA1-202ENST00000458649 A0A087X0B3 334 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CFLARO15519 480 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CTIFO43310 598 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 TMEM253P0C7T8 217 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM110CQ1W6H9 321 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 FIBCD1Q8N539 461 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 SENP1Q9P0U3 644 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 PAK5Q9P286 719 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 LTN1O94822 1766 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 IRF6O14896 467 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 EIF3HO15372 352 aaKnown RBP eCLIP11.13□□□□□ -0.638e-7■■■■□ 25.6
AMBRA1-202ENST00000458649 KCNN4O15554 427 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 GNRH1P01148 92 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 WEE2P0C1S8 567 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CARSP49589 748 aaKnown RBP11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CATSPER1Q8NEC5 780 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 SLC30A5Q8TAD4 765 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
AMBRA1-202ENST00000458649 CARD9Q9H257 536 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms