RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LRG1P02750 347 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 SNAPC2Q13487 334 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 TCEA2Q15560 299 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 MTFMTQ96DP5 389 aaKnown RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 CATSPER2Q96P56 530 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 KATNAL1Q9BW62 490 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 RIC8BQ9NVN3 520 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 RPS6KL1Q9Y6S9 549 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 SH3BGRLO75368 114 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 PTK6Q13882 451 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 PTAR1Q7Z6K3 402 aaPredicted RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 UXS1Q8NBZ7 420 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 TMEM106CQ9BVX2 250 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 NIF3L1Q9GZT8 377 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 CXorf56Q9H5V9 222 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 FBXO28Q9NVF7 368 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 DNAJC16Q9Y2G8 782 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 MED24O75448 989 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 FAM107AO95990 144 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 TMED10P49755 219 aaKnown RBP20.35■□□□□ 0.85
SNX27-204ENST00000458013 OR8H2Q8N162 312 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 MED8Q96G25 268 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 INTS13Q9NVM9 706 aa20.35■□□□□ 0.85
SNX27-204ENST00000458013 TTLL13PA6NNM8 815 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 DARSP14868 501 aaKnown RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 ACO1P21399 889 aaKnown RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 SERPINB1P30740 379 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 DGKDQ16760 1214 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 WLSQ5T9L3 541 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 SGSM3Q96HU1 749 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 IMPAD1Q9NX62 359 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 MBL2P11226 248 aaPredicted RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 IFNLR1Q8IU57 520 aaPredicted RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 SLC20A1Q8WUM9 679 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 PDLIM2Q96JY6 352 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 TMEM120AQ9BXJ8 343 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 PCDHB2Q9Y5E7 798 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 FOXN3O00409 490 aaPredicted RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 MSH4O15457 936 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 STAU1O95793 577 aaKnown RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 PSMA4P25789 261 aaKnown RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 OTUD4Q01804 1114 aaKnown RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 CENPCQ03188 943 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 CBWD2Q8IUF1 395 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 BBS7Q8IWZ6 715 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 HACL1Q9UJ83 578 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 CDY2AQ9Y6F7 541 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 CDY1Q9Y6F8 540 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 GRK2P25098 689 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 DNAJB2P25686 324 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 CLCN3P51790 818 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 CSNK2BP67870 215 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 MTDHQ86UE4 582 aaKnown RBP20.34■□□□□ 0.85
SNX27-204ENST00000458013 SH3GL2Q99962 352 aa20.34■□□□□ 0.85
SNX27-204ENST00000458013 CYP7B1O75881 506 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 TPH1P17752 444 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 CACUL1Q86Y37 369 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 OSGEPQ9NPF4 335 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 ZNRF3Q9ULT6 936 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 USP20Q9Y2K6 914 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 SAC3D1A6NKF1 404 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 ZNF286BP0CG31 522 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 GPC1P35052 558 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 NFYCQ13952 458 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 EMC1Q8N766 993 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 TDRD5Q8NAT2 981 aaKnown RBP20.33■□□□□ 0.85
SNX27-204ENST00000458013 CALML6Q8TD86 181 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 RNF19AQ9NV58 838 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 EIF3LQ9Y262 564 aaKnown RBP20.33■□□□□ 0.85
SNX27-204ENST00000458013 CCL15-CCL14A0A0B4J2E2 113 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 C17orf102A2RUQ5 167 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 TP53BP2Q13625 1128 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 CSHL1Q14406 222 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 NFIL3Q16649 462 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 CCL15Q16663 113 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 MYOZ2Q9NPC6 264 aa20.33■□□□□ 0.85
SNX27-204ENST00000458013 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 SSU72P8A0A1W2PR75 194 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 TSPAN3O60637 253 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 LTFP02788 710 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 VHLP40337 213 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 MAPK9P45984 424 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 GMPSP49915 693 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 ZNF177Q13360 481 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 FBXO16Q8IX29 292 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 TIMM13Q9Y5L4 95 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 STX7O15400 261 aaKnown RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 ACADSBP45954 432 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 AQP5P55064 265 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 TRAF2Q12933 501 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 HIST2H2ACQ16777 129 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 EFHC1Q5JVL4 640 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 GNASQ5JWF2 1037 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 TCHHL1Q5QJ38 904 aaPredicted RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 HIST2H2AA3Q6FI13 130 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms