RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 C8orf48Q96LL4 319 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 IER2Q9BTL4 223 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 ZNF518BQ9C0D4 1074 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 RBM12Q9NTZ6 932 aaKnown RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 TRAV19A0A0A6YYK7 116 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 A8MXQ7 604 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 TRIM66O15016 1216 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-210ENST00000457104 LILRB5O75023 590 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 AKAP3O75969 853 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 KIF20AO95235 890 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 USP17L7P0C7H9 530 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ARSAP15289 507 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 NR2F2P24468 414 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 VAMP7P51809 220 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ZXDBP98169 803 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 RUNX3Q13761 415 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 CCINQ13939 588 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 PON2Q15165 354 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ZNF77Q15935 545 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 SGSM1Q2NKQ1 1148 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 EBF3Q9H4W6 596 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
VEGFA-210ENST00000457104 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
VEGFA-210ENST00000457104 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 CKMP06732 381 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 HDCP19113 662 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 ANXA13P27216 316 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 SATB1Q01826 763 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 PPP3CAQ08209 521 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 USP4Q13107 963 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 PNOCQ13519 176 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 BECN1Q14457 450 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 Q6ZS52 159 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-210ENST00000457104 SPEM1Q8N4L4 309 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 TAF4BQ92750 862 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
VEGFA-210ENST00000457104 TNFRSF10BO14763 440 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
VEGFA-210ENST00000457104 TRIM49P0CI25 452 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 TRIM49CP0CI26 452 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 TCF3P15923 654 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 ASPAP45381 313 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 CCR3P51677 355 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 NUCB2P80303 420 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 ENPEPQ07075 957 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 TAF10Q12962 218 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 ADAM9Q13443 819 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 LRRC32Q14392 662 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 MTF1Q14872 753 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 DGKKQ5KSL6 1271 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
VEGFA-210ENST00000457104 ACOT1Q86TX2 421 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 FAM186BQ8IYM0 893 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 CRYBG2Q8N1P7 616 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 SH3RF2Q8TEC5 729 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-210ENST00000457104 FBRSL1Q9HCM7 1045 aaKnown RBP13.16□□□□□ -0.3
VEGFA-210ENST00000457104 TRPM5Q9NZQ8 1165 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 ARHGAP26Q9UNA1 814 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 GPR179Q6PRD1 2367 aa13.16□□□□□ -0.3
VEGFA-210ENST00000457104 K7ESF4 209 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 OLFM2O95897 454 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 OAS1P00973 400 aaKnown RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 PFKLP17858 780 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 HOXC13P31276 330 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 PSMC2P35998 433 aaKnown RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 PRCPP42785 496 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 CXCL12P48061 93 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 PPP3CCP48454 512 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 GCLMP48507 274 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 NDST1P52848 882 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms