RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ZBED8Q8IZ13 594 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 NAT8LQ8N9F0 302 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 KCTD6Q8NC69 237 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 CPT1BQ92523 772 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 EMID1Q96A84 441 aaPredicted RBP19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 FAM124BQ9H5Z6 455 aaPredicted RBP19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 ITGA11Q9UKX5 1188 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 ENDOD1O94919 500 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 CYP2C8P10632 490 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 PCK1P35558 622 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 CTCFP49711 727 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 RBP5P82980 135 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 MKRN3Q13064 507 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 NUGGCQ68CJ6 796 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 UBA3Q8TBC4 463 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 MAGEC3Q8TD91 643 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 AFG1LQ8WV93 481 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 PPCSQ9HAB8 311 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 ASNSD1Q9NWL6 643 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 ZMYND8Q9ULU4 1186 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 USP18Q9UMW8 372 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 SLC12A4Q9UP95 1085 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 C2CD2Q9Y426 696 aa19.26■□□□□ 0.67
SEMA3B-209ENST00000456560 FAM47DPA6NHR8 397 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 APOC4-APOC2K7ER74 178 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 TSPAN1O60635 241 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 RNF8O76064 485 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 APOC2P02655 101 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 STX2P32856 288 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 ZNF143P52747 638 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 NDST1P52848 882 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 WDR4P57081 412 aaKnown RBP19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 GPX6P59796 221 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 GAD2Q05329 585 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 ANKRD22Q5VYY1 191 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 LCLAT1Q6UWP7 414 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 RFX6Q8HWS3 928 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 UNC45BQ8IWX7 931 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 DENND1AQ8TEH3 1009 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 PEBP4Q96S96 227 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 ADPGKQ9BRR6 497 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 VPS37BQ9H9H4 285 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 DPP3Q9NY33 737 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 ZNF286BP0CG31 522 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 ELF1P32519 619 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 SLC18A1P54219 525 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 SNAPC2Q13487 334 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 HIF1AQ16665 826 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 LDLRAD1Q5T700 205 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 FAM102AQ5T9C2 384 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 TRNP1Q6NT89 227 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 CYP4V2Q6ZWL3 525 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 RSAD2Q8WXG1 361 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 ACAP3Q96P50 834 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 TGS1Q96RS0 853 aaKnown RBP19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 SLC24A2Q9UI40 661 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 KIAA1257Q9ULG3 409 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 PLXNA1Q9UIW2 1896 aa19.25■□□□□ 0.67
SEMA3B-209ENST00000456560 CLUHO75153 1309 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 A0A1B0GUA9 196 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 POC1B-GALNT4F8VUJ3 575 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 PFKMP08237 780 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 EZRP15311 586 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 FOXN2P32314 431 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 ADCY1Q08828 1119 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 PKN2Q16513 984 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 EFHC2Q5JST6 749 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 FNBP1LQ5T0N5 605 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 TTC39CQ8N584 583 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 GPRC5AQ8NFJ5 357 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 HSPH1Q92598 858 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 CNPY3Q9BT09 278 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 RSAD1Q9HA92 442 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 PRKAG3Q9UGI9 489 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 C2CD4BA6NLJ0 364 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 E7ESA3 106 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 GOLGA8MH3BSY2 632 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 PRPF4O43172 522 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■□□□ 14
SEMA3B-209ENST00000456560 MGRN1O60291 552 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 BANF1O75531 89 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 TAC1P20366 129 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 GPD1P21695 349 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 E2F5Q15329 346 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 MSS51Q4VC12 460 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 N4BP2L2Q92802 583 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 TRABDQ9H4I3 376 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 ABCF3Q9NUQ8 709 aa19.24■□□□□ 0.67
SEMA3B-209ENST00000456560 SUN1O94901 812 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 ADORA2AP29274 412 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 SLC8A1P32418 973 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 ADCYAP1R1P41586 468 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 ARL4CP56559 192 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 EIF3EP60228 445 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 ELF3P78545 371 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms