RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 KDELC2Q7Z4H8 507 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 BHLHE22Q8NFJ8 381 aaPredicted RBP12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 PAGR1Q9BTK6 254 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC5A4Q9NY91 659 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC39A10Q9ULF5 831 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 METP08581 1390 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 FASP25445 335 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SSTR1P30872 391 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 MMP13P45452 471 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 FBXW8Q8N3Y1 598 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 ZNF570Q96NI8 536 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SEPHS2Q99611 448 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 EPS8L2Q9H6S3 715 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 ENTPD7Q9NQZ7 604 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 MAP3K13O43283 966 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 ME2P23368 584 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 IL5RAQ01344 420 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 DGCR6Q14129 220 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 COG2Q14746 738 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 C12orf60Q5U649 245 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 PIF1Q9H611 641 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 MAP3K15Q6ZN16 1313 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SYNDIG1LA6NDD5 238 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 CENPXA8MT69 81 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 KCNK10P57789 538 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 SEL1L3Q68CR1 1132 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 WDR59Q6PJI9 974 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 EIF1ADQ8N9N8 165 aaKnown RBP12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 RDM1Q8NG50 284 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 TMEM121Q9BTD3 319 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 BTBD3Q9Y2F9 522 aa12.8□□□□□ -0.36
NEDD4L-208ENST00000456173 GRIN2DO15399 1336 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 GLRA3O75311 464 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 MAGP20916 626 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 MTMR2Q13614 643 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 KHDC1Q4VXA5 237 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 KLHL17Q6TDP4 642 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ENOSF1Q7L5Y1 443 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SNX32Q86XE0 403 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ULK2Q8IYT8 1036 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 DHRSXQ8N5I4 330 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ZBTB8BQ8NAP8 495 aaPredicted RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 RORBQ92753 470 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 MAGED4Q96JG8 741 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.363e-8■□□□□ 9
NEDD4L-208ENST00000456173 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 HEATR9A2RTY3 570 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ZNF699Q32M78 642 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 NT5DC1Q5TFE4 455 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 AKAP14Q86UN6 197 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ZSWIM2Q8NEG5 633 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 NRBP2Q9NSY0 501 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 COQ6Q9Y2Z9 468 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 PCDHGA3Q9Y5H0 932 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 PSAPP07602 524 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SPANXN2Q5MJ10 180 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SZRD1Q7Z422 152 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 PODNQ7Z5L7 613 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 NT5DC3Q86UY8 548 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC26A11Q86WA9 606 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SPATA16Q9BXB7 569 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 NRDE2Q9H7Z3 1164 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 TCF7L2Q9NQB0 619 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ARL8BQ9NVJ2 186 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 PAK5Q9P286 719 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 RPL26L1Q9UNX3 145 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 REXO2Q9Y3B8 237 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 UMODL1Q5DID0 1318 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ASMTLO95671 621 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 MT-CO1P00395 513 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ORC2Q13416 577 aaPredicted RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 ECHDC2Q86YB7 292 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SRPK1Q96SB4 655 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 CLEC4MQ9H2X3 399 aaPredicted RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SEL1LQ9UBV2 794 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 SLC13A4Q9UKG4 626 aa12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 GPC6Q9Y625 555 aaPredicted RBP12.79□□□□□ -0.36
NEDD4L-208ENST00000456173 TRPC5OSA6NMA1 111 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM25AB3EWG3 89 aa12.78□□□□□ -0.36
NEDD4L-208ENST00000456173 FAM25CB3EWG5 89 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms