RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MED15Q96RN5 788 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 TTLL2Q9BWV7 592 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 SRRTQ9BXP5 876 aaKnown RBP18.43■□□□□ 0.54
USP39-208ENST00000455732 FOXQ1Q9C009 403 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 FAM86C1Q9NVL1 165 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 EHD2Q9NZN4 543 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 DLGAP2Q9P1A6 1054 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 PATJQ8NI35 1801 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 VPS13AQ96RL7 3174 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 KANSL1LA0AUZ9 987 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 SHISA7A6NL88 538 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 F8VP50 259 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 H0Y858 1186 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 TADA3O75528 432 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 CYP4F8P98187 520 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 RBM43Q6ZSC3 357 aaKnown RBP18.42■□□□□ 0.54
USP39-208ENST00000455732 DENND5BQ6ZUT9 1274 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 PAQR9Q6ZVX9 377 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 ACOT1Q86TX2 421 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 FUKQ8N0W3 1084 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 DTWD2Q8NBA8 298 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 PJA1Q8NG27 643 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 ATOH1Q92858 354 aaPredicted RBP18.42■□□□□ 0.54
USP39-208ENST00000455732 SMARCD1Q96GM5 515 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 TWNKQ96RR1 684 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 NT5C1AQ9BXI3 368 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 BRD9Q9H8M2 597 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 TRPV5Q9NQA5 729 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 HEBP1Q9NRV9 189 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 TMEM30AQ9NV96 361 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 OBP2AQ9NY56 170 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 MAGED2Q9UNF1 606 aaPredicted RBP18.42■□□□□ 0.54
USP39-208ENST00000455732 SIT1Q9Y3P8 196 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 FANCMQ8IYD8 2048 aa18.42■□□□□ 0.54
USP39-208ENST00000455732 ARNTLO00327 626 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 CLDN5O00501 218 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 CCDC192P0DO97 292 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 GLULP15104 373 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 RFX1P22670 979 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 GDI1P31150 447 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 CACNA2D1P54289 1103 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 FCHO2Q0JRZ9 810 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 WHAMMQ8TF30 809 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 MRPS31Q92665 395 aaKnown RBP18.41■□□□□ 0.54
USP39-208ENST00000455732 IRF7Q92985 503 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 LRRC3BQ96PB8 259 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 SLC46A2Q9BY10 475 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 DNAI2Q9GZS0 605 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 DACH1Q9UI36 760 aa18.41■□□□□ 0.54
USP39-208ENST00000455732 HELZP42694 1942 aaKnown RBP18.41■□□□□ 0.54
USP39-208ENST00000455732 MBD3O95983 291 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 DCNP07585 359 aaKnown RBP18.4■□□□□ 0.54
USP39-208ENST00000455732 CD58P19256 250 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 ERCC5P28715 1186 aaPredicted RBP18.4■□□□□ 0.54
USP39-208ENST00000455732 CETN1Q12798 172 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 ORC1Q13415 861 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 CT47A1Q5JQC4 288 aaPredicted RBP18.4■□□□□ 0.54
USP39-208ENST00000455732 TPRG1Q6ZUI0 275 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 GPIHBP1Q8IV16 184 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 TATDN2Q93075 761 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 HNRNPABQ99729 332 aaKnown RBP18.4■□□□□ 0.54
USP39-208ENST00000455732 ARID3AQ99856 593 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 OSBPL6Q9BZF3 934 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 CSNK1G1Q9HCP0 422 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 DMAP1Q9NPF5 467 aaPredicted RBP18.4■□□□□ 0.54
USP39-208ENST00000455732 KRT82Q9NSB4 513 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 CISHQ9NSE2 258 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 MTF2Q9Y483 593 aaPredicted RBP18.4■□□□□ 0.54
USP39-208ENST00000455732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.4■□□□□ 0.54
USP39-208ENST00000455732 MYO15AQ9UKN7 3530 aa18.4■□□□□ 0.54
USP39-208ENST00000455732 GFRA3O60609 400 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 PRAMEF12O95522 483 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 AFPP02771 609 aaKnown RBP18.39■□□□□ 0.53
USP39-208ENST00000455732 CCDC130P13994 396 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 CD72P21854 359 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 USP46P62068 366 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 CUL2Q13617 745 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 MON1AQ86VX9 555 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 CMTM8Q8IZV2 173 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 C12orf29Q8N999 325 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 SLC2A14Q8TDB8 520 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 CNOT6LQ96LI5 555 aaKnown RBP18.39■□□□□ 0.53
USP39-208ENST00000455732 MED10Q9BTT4 135 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 LTB4R2Q9NPC1 389 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 CFAP54Q96N23 3096 aa18.39■□□□□ 0.53
USP39-208ENST00000455732 ZNF263O14978 683 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 CHADO15335 359 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 AP1G2O75843 785 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 PFKLP17858 780 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 TBXAS1P24557 533 aaPredicted RBP18.38■□□□□ 0.53
USP39-208ENST00000455732 PPP3CCP48454 512 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 YWHAEP62258 255 aaKnown RBP18.38■□□□□ 0.53
USP39-208ENST00000455732 ZNF268Q14587 947 aaPredicted RBP18.38■□□□□ 0.53
USP39-208ENST00000455732 IRF2BP1Q8IU81 584 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 UBR7Q8N806 425 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 MAB21L3Q8N8X9 362 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 LMO3Q8TAP4 145 aa18.38■□□□□ 0.53
USP39-208ENST00000455732 THAP9Q9H5L6 903 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms