RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 HPS4Q9NQG7 708 aa25.56■■□□□ 1.68
PPP1CB-208ENST00000455580 TMEM30AQ9NV96 361 aa25.56■■□□□ 1.68
PPP1CB-208ENST00000455580 CLSTN1O94985 981 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 P4HA1P13674 534 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 PSMC2P35998 433 aaKnown RBP25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 PNOCQ13519 176 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 LRRC32Q14392 662 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 GAS6Q14393 721 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 ZCWPW2Q504Y3 356 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 DGKKQ5KSL6 1271 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 TRIM68Q6AZZ1 485 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 CC2D1AQ6P1N0 951 aaPredicted RBP25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 TSSK4Q6SA08 328 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 SCARA5Q6ZMJ2 495 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 TNIP3Q96KP6 325 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 EBF3Q9H4W6 596 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 TRPM5Q9NZQ8 1165 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 PTPRDP23468 1912 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 GREB1Q4ZG55 1949 aa25.55■■□□□ 1.68
PPP1CB-208ENST00000455580 ASS1P00966 412 aaKnown RBP25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 HLA-DRAP01903 254 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 CKMP06732 381 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 PFKLP17858 780 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 HDCP19113 662 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 PPP3CCP48454 512 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 PON2Q15165 354 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 PAQR9Q6ZVX9 377 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 FAM186BQ8IYM0 893 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 ZBTB44Q8NCP5 570 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 RBM12Q9NTZ6 932 aaKnown RBP25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 ZSCAN32Q9NX65 697 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 PCDHGA2Q9Y5H1 932 aa25.54■■□□□ 1.68
PPP1CB-208ENST00000455580 PTPRZ1P23471 2315 aaPredicted RBP25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 FANCMQ8IYD8 2048 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 ZNF840PA6NDX5 716 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 OTOL1A6NHN0 477 aaPredicted RBP25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 KRT13P13646 458 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 TCF3P15923 654 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 PPP3CAQ08209 521 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 MTF1Q14872 753 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 PDGFRLQ15198 375 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 ZNF77Q15935 545 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 EDRF1Q3B7T1 1238 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 SPOPLQ6IQ16 392 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 SMYD4Q8IYR2 804 aaPredicted RBP25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 SPEM1Q8N4L4 309 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 ATRIPQ8WXE1 791 aa25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 FAM126AQ9BYI3 521 aaPredicted RBP25.53■■□□□ 1.68
PPP1CB-208ENST00000455580 RIF1Q5UIP0 2472 aaKnown RBP25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 KIF26AQ9ULI4 1882 aaPredicted RBP25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 KINO60870 393 aaKnown RBP25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 TRIM49P0CI25 452 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 TRIM49CP0CI26 452 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 TDGF1P13385 188 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 ARSAP15289 507 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 PIK3CAP42336 1068 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 GCLMP48507 274 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 PDE6CP51160 858 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 CCR3P51677 355 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 USP4Q13107 963 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 ACOT1Q86TX2 421 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 UNC93AQ86WB7 457 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 NUP93Q8N1F7 819 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 CRYBG2Q8N1P7 616 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 SUMF1Q8NBK3 374 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 GSDMAQ96QA5 445 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 KCNK16Q96T55 309 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 RMND1Q9NWS8 449 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 ARHGAP26Q9UNA1 814 aa25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 ZNF638Q14966 1978 aaKnown RBP25.52■■□□□ 1.68
PPP1CB-208ENST00000455580 LILRB5O75023 590 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 PRCPP42785 496 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 ASPAP45381 313 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 CXCL12P48061 93 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 TAF10Q12962 218 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 CCINQ13939 588 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 FAM35AQ86V20 835 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 SYNPOQ8N3V7 929 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 SPATA20Q8TB22 786 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 SH3RF2Q8TEC5 729 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 OSCP1Q8WVF1 389 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 CHFRQ96EP1 664 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 TIGD1Q96MW7 591 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 MED10Q9BTT4 135 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 DUS2Q9NX74 493 aaKnown RBP25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 ATP8B3O60423 1300 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 ANAPC1Q9H1A4 1944 aa25.51■■□□□ 1.67
PPP1CB-208ENST00000455580 NDST1P52848 882 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 AMPD2Q01433 879 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 PPP2R5DQ14738 602 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 COBLL1Q53SF7 1204 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 ZNF658Q5TYW1 1059 aaPredicted RBP25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 FUKQ8N0W3 1084 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 TAS1R2Q8TE23 839 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 SLITRK1Q96PX8 696 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 RNF38Q9H0F5 515 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 APOBEC3GQ9HC16 384 aaKnown RBP25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 PCDHA5Q9Y5H7 936 aa25.5■■□□□ 1.67
PPP1CB-208ENST00000455580 TRDMT1O14717 391 aaKnown RBP25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 TNFRSF10BO14763 440 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms