RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CDH8P55286 799 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 CYP27A1Q02318 531 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 LMNB2Q03252 620 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
GPC1-206ENST00000455111 STK4Q13043 487 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 PDGFRLQ15198 375 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 CCDC6Q16204 474 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 TDRD10Q5VZ19 366 aaKnown RBP17.13■□□□□ 0.33
GPC1-206ENST00000455111 VSTM1Q6UX27 236 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 KBTBD6Q86V97 674 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 GPR161Q8N6U8 529 aaKnown RBP17.13■□□□□ 0.33
GPC1-206ENST00000455111 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 P2RY13Q9BPV8 354 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 SMYD3Q9H7B4 428 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 KIAA1586Q9HCI6 787 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 DMAC2Q9NW81 257 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 ARHGAP26Q9UNA1 814 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 LAMA1P25391 3075 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 UBE4BO95155 1302 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 NCOR2Q9Y618 2525 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 ZNF840PA6NDX5 716 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 LRRIQ3A6PVS8 624 aaPredicted RBP17.12■□□□□ 0.33
GPC1-206ENST00000455111 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
GPC1-206ENST00000455111 CKMP06732 381 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 PTPN1P18031 435 aaKnown RBP17.12■□□□□ 0.33
GPC1-206ENST00000455111 TNNI1P19237 187 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 CNR2P34972 360 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 GNL1P36915 607 aaPredicted RBP17.12■□□□□ 0.33
GPC1-206ENST00000455111 GRIK1P39086 918 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 PGFP49763 221 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 DLG4P78352 724 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 CSRP2Q16527 193 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 WDR72Q3MJ13 1102 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 C1orf220Q5T0J3 134 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 C4orf50Q6ZRC1 276 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 TTC16Q8NEE8 873 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 WBP2Q969T9 261 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 C8orf48Q96LL4 319 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 HHIPQ96QV1 700 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 MMS19Q96T76 1030 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 RCOR1Q9UKL0 485 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
GPC1-206ENST00000455111 TNRC6BQ9UPQ9 1833 aaKnown RBP17.12■□□□□ 0.33
GPC1-206ENST00000455111 PVALEFA0A1B0GWK0 134 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 PRR5-ARHGAP8B1AHC4 643 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 K7EQS6 105 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 LEFTY2O00292 366 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 OAS1P00973 400 aaKnown RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 C4BPAP04003 597 aaKnown RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 HNRNPLP14866 589 aaKnown RBP eCLIP17.11■□□□□ 0.33
GPC1-206ENST00000455111 HDCP19113 662 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 CLDN10P78369 228 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 ARHGAP8P85298 464 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 GRSF1Q12849 480 aaKnown RBP eCLIP17.11■□□□□ 0.33
GPC1-206ENST00000455111 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 KNOP1Q1ED39 458 aaKnown RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 C12orf40Q86WS4 652 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 OR6B3Q8NGW1 331 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 RPLP0P6Q8NHW5 317 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 PARD3BQ8TEW8 1205 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 GAB3Q8WWW8 586 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 CD101Q93033 1021 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
GPC1-206ENST00000455111 KCNK16Q96T55 309 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 KCTD10Q9H3F6 313 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 SMOC1Q9H4F8 434 aa17.11■□□□□ 0.33
GPC1-206ENST00000455111 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.1■□□□□ 0.33
GPC1-206ENST00000455111 TNFRSF10BO14763 440 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 DCLK1O15075 740 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 AXIN1O15169 862 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 LRP3O75074 770 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 DRD1P21728 446 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 SLC7A9P82251 487 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 AMPD3Q01432 767 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 TAF10Q12962 218 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
GPC1-206ENST00000455111 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 ZMIZ2Q8NF64 920 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
GPC1-206ENST00000455111 PAGE5Q96GU1 130 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 ARRDC1-AS1Q9H2J1 176 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 VRTNQ9H8Y1 702 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
GPC1-206ENST00000455111 HMGXB4Q9UGU5 601 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
GPC1-206ENST00000455111 RAB23Q9ULC3 237 aa17.1■□□□□ 0.33
GPC1-206ENST00000455111 CCDC163A0A0D9SF12 145 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 SLC30A4O14863 429 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 BEST1O76090 585 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 EPN2O95208 641 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 CYP17A1P05093 508 aa17.09■□□□□ 0.33
GPC1-206ENST00000455111 FAM163BP0C2L3 166 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms