RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 TFDP1Q14186 410 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 KCTD2Q14681 263 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 TAZQ16635 292 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 EFHC2Q5JST6 749 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 RNASEH2BQ5TBB1 312 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ERICH1Q86X53 443 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ATP11CQ8NB49 1132 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 SLC35B2Q8TB61 432 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 APBB2Q92870 758 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ANKRD36BP1Q96IX9 119 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 TARS2Q9BW92 718 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 SAYSD1Q9NPB0 183 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 USH1CQ9Y6N9 552 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 PTPRJQ12913 1337 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 A0A1W2PQ45 241 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 A0A1W2PQY0 241 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 SIGLEC16A6NMB1 481 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CLTBP09497 229 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CD58P19256 250 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ATP4AP20648 1035 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 GBP2P32456 591 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CDKN2BP42772 138 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ARSEP51690 589 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ARL4CP56559 192 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 NCALDP61601 193 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 SMAD3P84022 425 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CAPSQ13938 189 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 PDK4Q16654 411 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 MAPK6Q16659 721 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 SPRED3Q2MJR0 410 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 PARP6Q2NL67 630 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 BBS12Q6ZW61 710 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 RNF180Q86T96 592 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 VSIG1Q86XK7 387 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 PPIL6Q8IXY8 311 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ANKRD42Q8N9B4 389 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 GIMAP7Q8NHV1 300 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 MYLIPQ8WY64 445 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 SEPT1Q8WYJ6 367 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 INPP5DQ92835 1189 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TINF2Q9BSI4 451 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TUBB6Q9BUF5 446 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 HEMGNQ9BXL5 484 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 PITPNM3Q9BZ71 974 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 HAPLN2Q9GZV7 340 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 NOD2Q9HC29 1040 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ARHGEF3Q9NR81 526 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ANKFY1Q9P2R3 1169 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 USTQ9Y2C2 406 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 RALGAPA2Q2PPJ7 1873 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 VGLL3A8MV65 326 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 E7ESA3 106 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TM9SF1O15321 606 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 FAM189A1O60320 539 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 LGR5O75473 907 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 UBOX5O94941 541 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TAC1P20366 129 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CCND1P24385 295 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ATICP31939 592 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 STAT5BP51692 787 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 POU5F1BQ06416 359 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TMED2Q15363 201 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 HIF1AQ16665 826 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ZNF792Q3KQV3 632 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 SPOPLQ6IQ16 392 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 METTL7BQ6UX53 244 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 MFSD7Q6UXD7 560 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 C4orf22Q6V702 233 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 PLPPR4Q7Z2D5 763 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 SRRM1Q8IYB3 904 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 AGGF1Q8N302 714 aaeCLIP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 DENND1AQ8TEH3 1009 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TMEM143Q96AN5 459 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 KLHL29Q96CT2 875 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 TMEM237Q96Q45 408 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ACO2Q99798 780 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 NFKBIZQ9BYH8 718 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ECT2Q9H8V3 914 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 CISHQ9NSE2 258 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 ABCF3Q9NUQ8 709 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 DNPEPQ9ULA0 475 aa11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-206ENST00000454704 IGKV6-21A0A0C4DH24 114 aa11.08□□□□□ -0.64
GTF3C2-206ENST00000454704 ADAMTS4O75173 837 aa11.08□□□□□ -0.64
GTF3C2-206ENST00000454704 FAM155BO75949 473 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms