RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MAGED2Q9UNF1 606 aaPredicted RBP29.66■■■□□ 2.34
SMARCC1-203ENST00000454240 MUC3AQ02505 3323 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 ANAPC1Q9H1A4 1944 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 A0A1W2PRU2 124 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 F11P03951 625 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 VDRP11473 427 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 KLHDC7AQ5VTJ3 777 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 CLEC20AQ6ZU45 233 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 TMEM150AQ86TG1 271 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 TTLL2Q9BWV7 592 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 PLCB1Q9NQ66 1216 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 UXTQ9UBK9 157 aaPredicted RBP29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 DNAJC12Q9UKB3 198 aa29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 AJAP1Q9UKB5 411 aaPredicted RBP29.65■■■□□ 2.34
SMARCC1-203ENST00000454240 TNFRSF10BO14763 440 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 CDC25CP30307 473 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 MAP3K7CLP57077 242 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 TEAD2Q15562 447 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 ARHGAP44Q17R89 818 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 SGO2Q562F6 1265 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 RNF135Q8IUD6 432 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 NUP93Q8N1F7 819 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 SHC3Q92529 594 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 MCRS1Q96EZ8 462 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 LSM14BQ9BX40 385 aaKnown RBP29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 DUSP16Q9BY84 665 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 LIMD1Q9UGP4 676 aa29.64■■■□□ 2.34
SMARCC1-203ENST00000454240 CD19P15391 556 aa29.63■■■□□ 2.33
SMARCC1-203ENST00000454240 USP46P62068 366 aa29.63■■■□□ 2.33
SMARCC1-203ENST00000454240 GPR88Q9GZN0 384 aa29.63■■■□□ 2.33
SMARCC1-203ENST00000454240 ATXN3LQ9H3M9 355 aa29.63■■■□□ 2.33
SMARCC1-203ENST00000454240 EHD2Q9NZN4 543 aa29.63■■■□□ 2.33
SMARCC1-203ENST00000454240 SIK3Q9Y2K2 1263 aa29.63■■■□□ 2.33
SMARCC1-203ENST00000454240 KRT5P13647 590 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 NPR3P17342 541 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 UBXN1Q04323 297 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 ANKRD52Q8NB46 1076 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 TFAP2BQ92481 460 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 ERGIC2Q96RQ1 377 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 NAA15Q9BXJ9 866 aaKnown RBP29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 TSPY26PQ9H489 355 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 PNPLA8Q9NP80 782 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 IL37Q9NZH6 218 aa29.62■■■□□ 2.33
SMARCC1-203ENST00000454240 HHLA1C9JL84 531 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 O00370 1275 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 UCHL3P15374 230 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 RFX1P22670 979 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 KLK7P49862 253 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 TPM4P67936 248 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 ZSWIM3Q96MP5 696 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 GCNAQ96QF7 691 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 ZSWIM1Q9BR11 485 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 RTN4Q9NQC3 1192 aaKnown RBP29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 COMMD8Q9NX08 183 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 TSPAN16Q9UKR8 245 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 FHOD1Q9Y613 1164 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 TTC28Q96AY4 2481 aa29.61■■■□□ 2.33
SMARCC1-203ENST00000454240 NUP210Q8TEM1 1887 aaPredicted RBP29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 ANHXE9PGG2 379 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 TADA3O75528 432 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 RTN3O95197 1032 aaPredicted RBP29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 SLC5A3P53794 718 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 ZNF445P59923 1031 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 SYCP1Q15431 976 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 CNGA2Q16280 664 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 GOLGA7BQ2TAP0 167 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 LCLAT1Q6UWP7 414 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 TTC30AQ86WT1 665 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 UBXN6Q9BZV1 441 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 GANQ9H2C0 597 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 KCNK12Q9HB15 430 aa29.6■■■□□ 2.33
SMARCC1-203ENST00000454240 GOLGA6L19H0YKK7 550 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 FOXN3O00409 490 aaPredicted RBP29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 CALCAP01258 141 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 CYP4F8P98187 520 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 STILQ15468 1287 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 ARHGAP15Q53QZ3 475 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 STXBP5Q5T5C0 1151 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 SCAMP5Q8TAC9 235 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 NXPE3Q969Y0 559 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 IGSF9Q9P2J2 1179 aa29.59■■■□□ 2.33
SMARCC1-203ENST00000454240 FAM92AA1XBS5 289 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 TEX33O43247 280 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 BRD2P25440 801 aaKnown RBP29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 YWHAQP27348 245 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 HTR4Q13639 388 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 PKDCCQ504Y2 493 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 GPR158Q5T848 1215 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 ASB16Q96NS5 453 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 TASP1Q9H6P5 420 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 HESX1Q9UBX0 185 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 BDP1A6H8Y1 2624 aa29.58■■■□□ 2.33
SMARCC1-203ENST00000454240 A0A1B0GTH6 734 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 SOBPA7XYQ1 873 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 TNFRSF10AO00220 468 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 ASGR2P07307 311 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 USP8P40818 1118 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 BCAT1P54687 386 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 TAF10Q12962 218 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms