RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, human

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX59-208	ENST00000453944	TMX4	Q9H1E5	349 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	FSCN3	Q9NQT6	498 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	PRDM8	Q9NQV8	689 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	TMOD4	Q9NZQ9	345 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	GJD2	Q9UKL4	321 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	SSX2IP	Q9Y2D8	614 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944		F5H697	171 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944		J3KTA2	159 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ZSCAN9	O15535	394 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ERN1	O75460	977 aa	Known RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	GPANK1	O95872	356 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	CSF1R	P07333	972 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	KCNA2	P16389	499 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	RXRA	P19793	462 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ITGAL	P20701	1170 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	CST5	P28325	142 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	AKT1	P31749	480 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SCNN1G	P51170	649 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	GEMIN4	P57678	1058 aa	Known RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	LOXL3	P58215	753 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	AP2B1	P63010	937 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SCAP	Q12770	1279 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	FSTL1	Q12841	308 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	TRIM71	Q2Q1W2	868 aa	Known RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	BTBD16	Q32M84	506 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	INTS11	Q5TA45	600 aa	Known RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ANKRD45	Q5TZF3	282 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ABLIM2	Q6H8Q1	611 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944		Q6ZSN1	163 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	TMPRSS9	Q7Z410	1059 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	KRT73	Q86Y46	540 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	C2CD5	Q86YS7	1000 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SPART	Q8N0X7	666 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	ESX1	Q8N693	406 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	C11orf44	Q8N8P7	122 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	NAXE	Q8NCW5	288 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SPPL3	Q8TCT6	385 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	GRAMD1A	Q96CP6	724 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	PPM1M	Q96MI6	270 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	TRAPPC9	Q96Q05	1148 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SENP7	Q9BQF6	1050 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	RTKN	Q9BST9	563 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	DDX23	Q9BUQ8	820 aa	Known RBP	4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	GPR87	Q9BY21	358 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	TRIM5	Q9C035	493 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	FAM83D	Q9H4H8	585 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SAYSD1	Q9NPB0	183 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	SERTAD3	Q9UJW9	196 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	DAPP1	Q9UN19	280 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	MAP3K2	Q9Y2U5	619 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	RNF114	Q9Y508	228 aa		4.55	□□□□□ -1.68
DDX59-208	ENST00000453944	PNMA6E	A0A0J9YXQ4	647 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	CAPN14	A8MX76	684 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944		H0Y3Z8	333 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	CD3EAP	O15446	510 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	GPR42	O15529	346 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	CCNT2	O60583	730 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	PPP6R2	O75170	966 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	TAF5L	O75529	589 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	KRT38	O76015	456 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	CD4	P01730	458 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	PDHA1	P08559	390 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	ATP1A3	P13637	1013 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	SEC24C	P53992	1094 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	ALDH18A1	P54886	795 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	FPGS	Q05932	587 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	GPS1	Q13098	491 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	DYRK1A	Q13627	763 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	ATP1A4	Q13733	1029 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	SURF1	Q15526	300 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	ADCK5	Q3MIX3	580 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	RBM20	Q5T481	1227 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	RETSAT	Q6NUM9	610 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	RINT1	Q6NUQ1	792 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	FOXR2	Q6PJQ5	311 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	LRRC55	Q6ZSA7	311 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	LRRTM4	Q86VH4	590 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	MAPKAPK5	Q8IW41	473 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	SLC30A5	Q8TAD4	765 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	NACC2	Q96BF6	587 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	MCRS1	Q96EZ8	462 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	COG8	Q96MW5	612 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	HIST1H2AA	Q96QV6	131 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	SEC62	Q99442	399 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	PYM1	Q9BRP8	204 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	BRD8	Q9H0E9	1235 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	VPS16	Q9H269	839 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	TP63	Q9H3D4	680 aa	Predicted RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	RNPEP	Q9H4A4	650 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	MSL2	Q9HCI7	577 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	TRPM5	Q9NZQ8	1165 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	DNAJB11	Q9UBS4	358 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	EIF2B4	Q9UI10	523 aa	Known RBP	4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	SLC30A1	Q9Y6M5	507 aa		4.54	□□□□□ -1.68
DDX59-208	ENST00000453944	XDH	P47989	1333 aa		4.53	□□□□□ -1.68

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