RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LRP8Q14114 963 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 SPATA1Q5VX52 437 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAM111BQ6SJ93 734 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 RASGRP3Q8IV61 690 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 PSD4Q8NDX1 1056 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 SHCBP1Q8NEM2 672 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 ADAMTS17Q8TE56 1095 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 ST8SIA4Q92187 359 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 PPP2R3CQ969Q6 453 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZUFSPQ96AP4 578 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 MCRS1Q96EZ8 462 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 RSRC1Q96IZ7 334 aaKnown RBP4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 SIGLEC10Q96LC7 697 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 TCF25Q9BQ70 676 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 GPR63Q9BZJ6 419 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 TRIM5Q9C035 493 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 SIK2Q9H0K1 926 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 SLC25A32Q9H2D1 315 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 ABHD16BQ9H3Z7 469 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 CHODLQ9H9P2 273 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 SEPSECSQ9HD40 501 aaKnown RBP4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 CTTNBP2NLQ9P2B4 639 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 CNTN6Q9UQ52 1028 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 F5H0A9 414 aaPredicted RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 POLRMTO00411 1230 aaKnown RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 KRT38O76015 456 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 HGFP14210 728 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 GCSHP23434 173 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 NTSR1P30989 418 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 MYO1EQ12965 1108 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 PRKG2Q13237 762 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 PDE1CQ14123 709 aaPredicted RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 SMAD1Q15797 465 aaKnown RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 GALNTL6Q49A17 601 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 ATPAF1Q5TC12 328 aaPredicted RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 CACHD1Q5VU97 1274 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 RINT1Q6NUQ1 792 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 NFRKBQ6P4R8 1299 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 PDXDC1Q6P996 788 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 DSTYKQ6XUX3 929 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 C4orf50Q6ZRC1 276 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 FASTKD5Q7L8L6 764 aaKnown RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 RALYLQ86SE5 291 aaKnown RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZNF761Q86XN6 746 aaPredicted RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 KBTBD2Q8IY47 623 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 NRSN1Q8IZ57 195 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 CARFQ8N187 725 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 GALNT4Q8N4A0 578 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 Q8NA96 180 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 TP53I13Q8NBR0 393 aaPredicted RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 CEP70Q8NHQ1 597 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZFP28Q8NHY6 868 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 DNAJB14Q8TBM8 379 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 NUP133Q8WUM0 1156 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 UCMAQ8WVF2 138 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZBTB45Q96K62 511 aaPredicted RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 TRIB1Q96RU8 372 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 CXorf36Q9H7Y0 433 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 OLA1Q9NTK5 396 aaKnown RBP4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 NTMQ9P121 344 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 KCND3Q9UK17 655 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 ASAP1Q9ULH1 1129 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 DNAJC16Q9Y2G8 782 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 AFG3L2Q9Y4W6 797 aa4.78□□□□□ -1.64
HMGN3P1-201ENST00000453847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 A0A1W2PRX2 142 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 PGPEP1LA6NFU8 196 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 ETV2O00321 342 aaPredicted RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 BIN1O00499 593 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 RPP40O75818 363 aaKnown RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 SUN1O94901 812 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 RASAL1O95294 804 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 VIPP01282 170 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 CSF1RP07333 972 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 HNRNPA1P09651 372 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 GLDCP23378 1020 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 HTR7P34969 479 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 MAGEA10P43363 369 aaPredicted RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 GCLCP48506 637 aaPredicted RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 CCT4P50991 539 aaKnown RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 CAP1Q01518 475 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 MC2RQ01718 297 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 MLANAQ16655 118 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 MGAT5BQ3V5L5 792 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 FAM205BPQ63HN1 556 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 ACAD10Q6JQN1 1059 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 EFCAB12Q6NXP0 572 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 TAPT1Q6NXT6 567 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 DRICH1Q6PGQ1 229 aaPredicted RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 BRINP3Q76B58 766 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 RAB11FIP2Q7L804 512 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 SYT13Q7L8C5 426 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 FAM83AQ86UY5 434 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 TMEM57Q8N5G2 664 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms