RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GPD1P21695 349 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 KLRC2P26717 231 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 LMNB2Q03252 620 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 SAPCD2Q86UD0 394 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 ZC3H18Q86VM9 953 aaKnown RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 ARRDC4Q8NCT1 418 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 CLEC4CQ8WTT0 213 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 PEBP4Q96S96 227 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 ZIC5Q96T25 663 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 RBM15Q96T37 977 aaKnown RBP eCLIP12.36□□□□□ -0.43
VTA1-203ENST00000452973 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 LCMT1Q9UIC8 334 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 LCP1P13796 627 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 IGFBP6P24592 240 aaPredicted RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 CTGFP29279 349 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 VCPP55072 806 aaKnown RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 GDF10P55107 478 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 CDC42EP1Q00587 391 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 LRRN4Q8WUT4 740 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 KPNA7A9QM74 516 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 RARBP10826 455 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 GNL1P36915 607 aaPredicted RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 COPS2P61201 443 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 ZBTB6Q15916 424 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 PTGISQ16647 500 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 TRMT10CQ7L0Y3 403 aaKnown RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 POLNQ7Z5Q5 900 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 ALLCQ8N6M5 410 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 MAK16Q9BXY0 300 aaKnown RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 SAYSD1Q9NPB0 183 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 IPPQ9Y573 584 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 PRPSAP2O60256 369 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 TTC4O95801 387 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 TRUB2O95900 331 aaKnown RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 FGFR1P11362 822 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 PECAM1P16284 738 aaPredicted RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 GABRB2P47870 512 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 ADAM17P78536 824 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 PURAQ00577 322 aaKnown RBP12.35□□□□□ -0.43
VTA1-203ENST00000452973 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 FNIP1Q8TF40 1166 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 RSAD2Q8WXG1 361 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 FAXDC2Q96IV6 333 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 APBA2Q99767 749 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 ADAM33Q9BZ11 813 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 ZFYVE28Q9HCC9 887 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 NINJ2Q9NZG7 142 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
VTA1-203ENST00000452973 BANF1O75531 89 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 AUHQ13825 339 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 ZC3H12AQ5D1E8 599 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 PPP6R3Q5H9R7 873 aaPredicted RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 C1orf228Q6PIY5 440 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 CNPY3Q9BT09 278 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 EPN3Q9H201 632 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 CNTN3Q9P232 1028 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 HAS3O00219 553 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 EBAG9O00559 213 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 ATP2C2O75185 946 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 TFE3P19532 575 aaPredicted RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 CAV1Q03135 178 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 KRT81Q14533 505 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 ALKAL1Q6UXT8 129 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 CCDC33Q8N5R6 958 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 FAM71DQ8N9W8 422 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 MGARPQ8TDB4 240 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 SLC2A14Q8TDB8 520 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 TLCD1Q96CP7 247 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 KIAA1257Q9ULG3 409 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 PAPSS1O43252 624 aaPredicted RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 AKR1A1P14550 325 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 CHN1P15882 459 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 IFNAR2P48551 515 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
VTA1-203ENST00000452973 GAD2Q05329 585 aa12.34□□□□□ -0.43
VTA1-203ENST00000452973 OASLQ15646 514 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms