RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 P4HA1P13674 534 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 HDCP19113 662 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 DPYDQ12882 1025 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 PDGFRLQ15198 375 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 SGSM1Q2NKQ1 1148 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 ARL14EPQ8N8R7 260 aaPredicted RBP13.73□□□□□ -0.21
CHD3-206ENST00000452447 NELL1Q92832 810 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 C8orf48Q96LL4 319 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 DPEP3Q9H4B8 488 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 SMYD3Q9H7B4 428 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 HPS4Q9NQG7 708 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 TRAF3IP3Q9Y228 551 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 IKBKBO14920 756 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 NR2F2P24468 414 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 PPP3CCP48454 512 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 CDH8P55286 799 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 USP46P62068 366 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
CHD3-206ENST00000452447 DLG4P78352 724 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 SATB1Q01826 763 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 GRSF1Q12849 480 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHD3-206ENST00000452447 CCINQ13939 588 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 GAS6Q14393 721 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 MTF1Q14872 753 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 SCARA5Q6ZMJ2 495 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 SUMF1Q8NBK3 374 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 EXOC4Q96A65 974 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 TNIP3Q96KP6 325 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 SLC22A12Q96S37 553 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 ZNF518BQ9C0D4 1074 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 DUS2Q9NX74 493 aaKnown RBP13.72□□□□□ -0.21
CHD3-206ENST00000452447 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 ATP8B3O60423 1300 aa13.72□□□□□ -0.21
CHD3-206ENST00000452447 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
CHD3-206ENST00000452447 C2orf78A6NCI8 922 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 CLDN5O00501 218 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 LILRB5O75023 590 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 ABL1P00519 1130 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 PFKLP17858 780 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 TRIM21P19474 475 aaKnown RBP13.71□□□□□ -0.21
CHD3-206ENST00000452447 RPL13P26373 211 aaKnown RBP13.71□□□□□ -0.21
CHD3-206ENST00000452447 RAP1GAPP47736 663 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 IFNAR2P48551 515 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 IFRD2Q12894 506 aaPredicted RBP13.71□□□□□ -0.21
CHD3-206ENST00000452447 ZACNQ401N2 412 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 Q6ZS52 159 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 SV2AQ7L0J3 742 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 RIN3Q8TB24 985 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 SH3RF2Q8TEC5 729 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 OSCP1Q8WVF1 389 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 TAF4BQ92750 862 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 SECISBP2LQ93073 1101 aaKnown RBP13.71□□□□□ -0.21
CHD3-206ENST00000452447 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 MED10Q9BTT4 135 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 TTLL2Q9BWV7 592 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 EPC1Q9H2F5 836 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 GCNT4Q9P109 453 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 NCDNQ9UBB6 729 aa13.71□□□□□ -0.21
CHD3-206ENST00000452447 SPAG17Q6Q759 2223 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 RALGAPA1Q6GYQ0 2036 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 GOLGA6L4A6NEF3 574 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 OTOL1A6NHN0 477 aaPredicted RBP13.71□□□□□ -0.22
CHD3-206ENST00000452447 MAPK13O15264 365 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 VNN1O95497 513 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 KRT13P13646 458 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 ARSAP15289 507 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 PIK3CAP42336 1068 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 VAMP7P51809 220 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 ZNF77Q15935 545 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 TMEM196Q5HYL7 178 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 INTS8Q75QN2 995 aaKnown RBP13.71□□□□□ -0.22
CHD3-206ENST00000452447 KIAA2013Q8IYS2 634 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 NUP93Q8N1F7 819 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 GUF1Q8N442 669 aaKnown RBP13.71□□□□□ -0.22
CHD3-206ENST00000452447 DCLK2Q8N568 766 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 ATP2A3Q93084 1043 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 ELMO3Q96BJ8 720 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 B3GNT5Q9BYG0 378 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 ECT2Q9H8V3 914 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 RAB23Q9ULC3 237 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 ARHGAP26Q9UNA1 814 aa13.71□□□□□ -0.22
CHD3-206ENST00000452447 SMG5Q9UPR3 1016 aaKnown RBP13.71□□□□□ -0.22
CHD3-206ENST00000452447 MYOFQ9NZM1 2061 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 TRDMT1O14717 391 aaKnown RBP13.7□□□□□ -0.22
CHD3-206ENST00000452447 RTN3O95197 1032 aaPredicted RBP13.7□□□□□ -0.22
CHD3-206ENST00000452447 TDGF1P13385 188 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 GJA4P35212 333 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 CACNA2D1P54289 1103 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 TAF10Q12962 218 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 USP4Q13107 963 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 NR1H3Q13133 447 aa13.7□□□□□ -0.22
CHD3-206ENST00000452447 ADAM9Q13443 819 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms