RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 GTSE1Q9NYZ3 720 aa21.71■■□□□ 1.07
UBE2D4-207ENST00000450743 EHD2Q9NZN4 543 aa21.71■■□□□ 1.07
UBE2D4-207ENST00000450743 TRAV19A0A0A6YYK7 116 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 CETN3O15182 167 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 USP17L7P0C7H9 530 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 ASPAP45381 313 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 SOX9P48436 509 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 TNK2Q07912 1038 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 C1orf228Q6PIY5 440 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 ACOT1Q86TX2 421 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 MAML2Q8IZL2 1156 aaPredicted RBP21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 TTC8Q8TAM2 541 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 FAM83CQ9BQN1 747 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 GTPBP4Q9BZE4 634 aaKnown RBP21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 IMPG2Q9BZV3 1241 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 MMRN2Q9H8L6 949 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 GKN1Q9NS71 199 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 GCNT4Q9P109 453 aa21.7■■□□□ 1.06
UBE2D4-207ENST00000450743 VPS13AQ96RL7 3174 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 SPECC1L-ADORA2AF8WAN1 911 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 KINO60870 393 aaKnown RBP21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 SP9P0CG40 484 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 EPB41P11171 864 aaKnown RBP21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 GTF2H1P32780 548 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 NDST1P52848 882 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 PAQR9Q6ZVX9 377 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 UNC93AQ86WB7 457 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 RALGPS2Q86X27 583 aaPredicted RBP21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 ADSSL1Q8N142 457 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 CRYBG2Q8N1P7 616 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 RIN3Q8TB24 985 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 TSG101Q99816 390 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 MED10Q9BTT4 135 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 TMEM8AQ9HCN3 771 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 TRPM5Q9NZQ8 1165 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 ATP8B3O60423 1300 aa21.69■■□□□ 1.06
UBE2D4-207ENST00000450743 C2orf78A6NCI8 922 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 LAMTOR5O43504 91 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 GFRA3O60609 400 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 GADD45BO75293 160 aaPredicted RBP21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 CKMP06732 381 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 CTHP32929 405 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 ITPRIPL2Q3MIP1 535 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 KRT39Q6A163 491 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 ANKRD40Q6AI12 368 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 FAM35AQ86V20 835 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 FUKQ8N0W3 1084 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 ARL14EPQ8N8R7 260 aaPredicted RBP21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 LMAN1LQ9HAT1 526 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 APOBEC3GQ9HC16 384 aaKnown RBP21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 HMGXB4Q9UGU5 601 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 MYO16Q9Y6X6 1858 aa21.68■■□□□ 1.06
UBE2D4-207ENST00000450743 USP34Q70CQ2 3546 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 MYOFQ9NZM1 2061 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 CHRNB1P11230 501 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 HDCP19113 662 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 PPP3CCP48454 512 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 PMS1P54277 932 aaKnown RBP21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 FKBP3Q00688 224 aaKnown RBP21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 ORC1Q13415 861 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 TXNDC11Q6PKC3 985 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 ZC3H3Q8IXZ2 948 aaKnown RBP21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 NUP93Q8N1F7 819 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 NKD2Q969F2 451 aaPredicted RBP21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 SMARCD1Q96GM5 515 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 KCNK16Q96T55 309 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 CHRDQ9H2X0 955 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 CYP3A43Q9HB55 503 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 HPS4Q9NQG7 708 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 FBXO4Q9UKT5 387 aa21.67■■□□□ 1.06
UBE2D4-207ENST00000450743 ZNF840PA6NDX5 716 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 STX10O60499 249 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 PFKLP17858 780 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 PDE6CP51160 858 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 LRRC63Q05C16 580 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 INCA1Q0VD86 236 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 TAF10Q12962 218 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 MTAPQ13126 283 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 RUNX3Q13761 415 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 ZNF77Q15935 545 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 TRIM68Q6AZZ1 485 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 ISM2Q6H9L7 571 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 CC2D1AQ6P1N0 951 aaPredicted RBP21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 ASCL5Q7RTU5 278 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 CCDC150Q8NCX0 1101 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 SLITRK1Q96PX8 696 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 NIF3L1Q9GZT8 377 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 EBF3Q9H4W6 596 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 DMAP1Q9NPF5 467 aaPredicted RBP21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 MAN1B1Q9UKM7 699 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 R4GN57 208 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 MYO15AQ9UKN7 3530 aa21.66■■□□□ 1.06
UBE2D4-207ENST00000450743 TRIM49BA6NDI0 452 aa21.65■■□□□ 1.06
UBE2D4-207ENST00000450743 PRR23AA6NEV1 266 aa21.65■■□□□ 1.06
UBE2D4-207ENST00000450743 SLC16A3O15427 465 aaKnown RBP21.65■■□□□ 1.06
UBE2D4-207ENST00000450743 RTN3O95197 1032 aaPredicted RBP21.65■■□□□ 1.06
UBE2D4-207ENST00000450743 CCDC130P13994 396 aa21.65■■□□□ 1.06
UBE2D4-207ENST00000450743 YWHAQP27348 245 aa21.65■■□□□ 1.06
UBE2D4-207ENST00000450743 MXI1P50539 228 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms