RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 GOLGA7BQ2TAP0 167 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 FBXO47Q5MNV8 452 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 UBAP2Q5T6F2 1119 aaKnown RBP16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 ARFGAP2Q8N6H7 521 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 ARFGAP1Q8N6T3 406 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 CREBZFQ9NS37 354 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 TRMT13Q9NUP7 481 aaKnown RBP16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 TULP2O00295 520 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 LIASO43766 372 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 CD4P01730 458 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 CAV1Q03135 178 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 LMNB2Q03252 620 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 FOXR1Q6PIV2 292 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 LCLAT1Q6UWP7 414 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 GSTA5Q7RTV2 222 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 MCRS1Q96EZ8 462 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 KIAA1257Q9ULG3 409 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 DCDC2CA8MYV0 355 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 KPNA7A9QM74 516 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 CAND2O75155 1236 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 KRT7P08729 469 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 PDGFRBP09619 1106 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 RGS7P49802 495 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 MAGOHP61326 146 aaKnown RBP16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 SMTNL2Q2TAL5 461 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 KBTBD7Q8WVZ9 684 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 ZWILCHQ9H900 591 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 FAM105AQ9NUU6 356 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 ANAPC5Q9UJX4 755 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 DNPEPQ9ULA0 475 aa16.91■□□□□ 0.3
AP000253.1-201ENST00000449339 GHRP10912 638 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 LMO2P25791 158 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 IL1R2P27930 398 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 CD52P31358 61 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 CHKAP35790 457 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 MLH1P40692 756 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 MDH1P40925 334 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 HADHQ16836 314 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 KCNT1Q5JUK3 1230 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 DRICH1Q6PGQ1 229 aaPredicted RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 TRMT10CQ7L0Y3 403 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 TTC30AQ86WT1 665 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 BCAS4Q8TDM0 211 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 TSPYL1Q9H0U9 437 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 C3orf70A6NLC5 250 aaPredicted RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 A8MXQ7 604 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 KLRC2P26717 231 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 CST5P28325 142 aaPredicted RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 LSP1P33241 339 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 CDR1P51861 262 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 FAM102AQ5T9C2 384 aaPredicted RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 MAP3K21Q5TCX8 1036 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 UHMK1Q8TAS1 419 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 RAET1EQ8TD07 263 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 PIWIL1Q96J94 861 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 PPP1R10Q96QC0 940 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 GAD1Q99259 594 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 CDC42EP4Q9H3Q1 356 aaKnown RBP16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 ZNF148Q9UQR1 794 aa16.9■□□□□ 0.3
AP000253.1-201ENST00000449339 E5RJQ4 531 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 TAF6P49848 677 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 PPP2R2AP63151 447 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 HTRA3P83110 453 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 ITGA7Q13683 1181 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 BBOF1Q8ND07 529 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 GSTCDQ8NEC7 633 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 TLCD1Q96CP7 247 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 PGM2Q96G03 612 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 ZNF560Q96MR9 790 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 MIOSQ9NXC5 875 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 SLC12A6Q9UHW9 1150 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 PADI3Q9ULW8 664 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 TLDC2A0PJX2 215 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 MGEA5O60502 916 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 LILRA4P59901 499 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 STILQ15468 1287 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 PRUNE1Q86TP1 453 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 RABEP2Q9H5N1 569 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 EFR3BQ9Y2G0 817 aa16.89■□□□□ 0.29
AP000253.1-201ENST00000449339 SMIM23A6NLE4 172 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 RNF8O76064 485 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 CCDC130P13994 396 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 HOXD10P28358 340 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 GNL1P36915 607 aaPredicted RBP16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 ACLYP53396 1101 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 ACAP1Q15027 740 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 CCDC142Q17RM4 750 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 P3H1Q32P28 736 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 PMF1Q6P1K2 205 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 FAM183BPQ6ZVS7 135 aa16.88■□□□□ 0.29
AP000253.1-201ENST00000449339 CROCCP2Q86T23 111 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms