RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 MED10Q9BTT4 135 aa12.58□□□□□ -0.4
SCAP-208ENST00000448217 DMAP1Q9NPF5 467 aaPredicted RBP12.58□□□□□ -0.4
SCAP-208ENST00000448217 TLR9Q9NR96 1032 aa12.58□□□□□ -0.4
SCAP-208ENST00000448217 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
SCAP-208ENST00000448217 MTCL1Q9Y4B5 1905 aaKnown RBP12.58□□□□□ -0.4
SCAP-208ENST00000448217 GREB1Q4ZG55 1949 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 WDR27A2RRH5 827 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 TRIM66O15016 1216 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 ADAM12O43184 909 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 GABBR2O75899 941 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 BEST1O76090 585 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 OR4Q2P0C623 313 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
SCAP-208ENST00000448217 CPB1P15086 417 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 ATF2P15336 505 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 BDNFP23560 247 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
SCAP-208ENST00000448217 ERVFC1P60507 584 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 CAMK1Q14012 370 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
SCAP-208ENST00000448217 LIN9Q5TKA1 542 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 RNF19BQ6ZMZ0 732 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 RTL10Q7L3V2 364 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 ARCQ7LC44 396 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 PIGZQ86VD9 579 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 RHOT2Q8IXI1 618 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 MRPL43Q8N983 215 aaKnown RBP12.57□□□□□ -0.4
SCAP-208ENST00000448217 C3orf20Q8ND61 904 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
SCAP-208ENST00000448217 UBE2Q2Q8WVN8 375 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 POF1BQ8WVV4 589 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 RFFLQ8WZ73 363 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 C18orf8Q96DM3 657 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 MCRS1Q96EZ8 462 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 THAP2Q9H0W7 228 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 NKX2-4Q9H2Z4 354 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 ALG13Q9NP73 1137 aaKnown RBP12.57□□□□□ -0.4
SCAP-208ENST00000448217 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 IL37Q9NZH6 218 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 UVRAGQ9P2Y5 699 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 CHD9Q3L8U1 2897 aa12.57□□□□□ -0.4
SCAP-208ENST00000448217 C2orf71A6NGG8 1288 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 ESPNB1AK53 854 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TULP2O00295 520 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TNFRSF10BO14763 440 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 GRM6O15303 877 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TEX28O15482 410 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 ZNF500O60304 480 aaPredicted RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 FBXO21O94952 628 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 CXCL14O95715 111 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 ERBB2P04626 1255 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 CNPP09543 421 aaKnown RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 RRM1P23921 792 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 CYP2F1P24903 491 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 DNAJB1P25685 340 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TUFMP49411 452 aaKnown RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 GPM6BQ13491 265 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 ARHGAP29Q52LW3 1261 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 PPP1R15BQ5SWA1 713 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 LILRA6Q6PI73 481 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TMC7Q7Z402 723 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 SPRED2Q7Z698 418 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 XYLT1Q86Y38 959 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 ATAD1Q8NBU5 361 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 ZNF653Q96CK0 615 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 SPATA17Q96L03 361 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 KLHL5Q96PQ7 755 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 TCF25Q9BQ70 676 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 EMILIN2Q9BXX0 1053 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 MRPL47Q9HD33 250 aaKnown RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 LCMT1Q9UIC8 334 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 SCINQ9Y6U3 715 aa12.56□□□□□ -0.4
SCAP-208ENST00000448217 COL4A4P53420 1690 aaPredicted RBP12.56□□□□□ -0.4
SCAP-208ENST00000448217 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 FAM92AA1XBS5 289 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 E5RJQ4 531 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 F8VP50 259 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 C2CD2LO14523 706 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 PAPSS1O43252 624 aaPredicted RBP12.55□□□□□ -0.4
SCAP-208ENST00000448217 SART1O43290 800 aaKnown RBP12.55□□□□□ -0.4
SCAP-208ENST00000448217 TUBB4AP04350 444 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 ADH1AP07327 375 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 RPL17P18621 184 aaKnown RBP12.55□□□□□ -0.4
SCAP-208ENST00000448217 ABCB4P21439 1286 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 DNAJB2P25686 324 aa12.55□□□□□ -0.4
SCAP-208ENST00000448217 MSNP26038 577 aaKnown RBP12.55□□□□□ -0.4
SCAP-208ENST00000448217 MAP3K7CLP57077 242 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms