RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 ZXDBP98169 803 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 DMWDQ09019 674 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 NCOA4Q13772 614 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 MTF1Q14872 753 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 PDGFRLQ15198 375 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 FSTL4Q6MZW2 842 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 KIAA2013Q8IYS2 634 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 ARL14EPQ8N8R7 260 aaPredicted RBP16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 FSIP1Q8NA03 581 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 B3GALNT2Q8NCR0 500 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 OSCP1Q8WVF1 389 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 B3GNT5Q9BYG0 378 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 SMYD3Q9H7B4 428 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 TRPC7Q9HCX4 862 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 NXF1Q9UBU9 619 aaKnown RBP16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 ARHGAP26Q9UNA1 814 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 TRAF3IP3Q9Y228 551 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 PTPRDP23468 1912 aa16.9■□□□□ 0.3
SPTLC1P1-201ENST00000447199 A0A1W2PQ27 194 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 A0A1W2PQ64 194 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 A0A1W2PQD8 194 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ZNF840PA6NDX5 716 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 A8MXQ7 604 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 CKMP06732 381 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 PFKLP17858 780 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 HOXA6P31267 233 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 CDH8P55286 799 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 DPYDQ12882 1025 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 BIRC3Q13489 604 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ZNF699Q32M78 642 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ZACNQ401N2 412 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 TMC2Q8TDI7 906 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ELOVL4Q9GZR5 314 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SCAND2PQ9GZW5 306 aaPredicted RBP16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 GOLPH3LQ9H4A5 285 aa16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 FBRSL1Q9HCM7 1045 aaKnown RBP16.89■□□□□ 0.29
SPTLC1P1-201ENST00000447199 GREB1Q4ZG55 1949 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 CLDN5O00501 218 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 PHACTR2O75167 634 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 OLFM2O95897 454 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 HDCP19113 662 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 TGM1P22735 817 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ANXA13P27216 316 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 HOXC13P31276 330 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ID4P47928 161 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 NFIL3Q16649 462 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 EML3Q32P44 896 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 NAIF1Q69YI7 327 aaPredicted RBP16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 PKN3Q6P5Z2 889 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 PAQR9Q6ZVX9 377 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SH3RF2Q8TEC5 729 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 HINFPQ9BQA5 517 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ECT2Q9H8V3 914 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 EHD2Q9NZN4 543 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 TRPM5Q9NZQ8 1165 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 WNT6Q9Y6F9 365 aa16.88■□□□□ 0.29
SPTLC1P1-201ENST00000447199 IKBKBO14920 756 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 MAPK13O15264 365 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 GJA4P35212 333 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 RAP1GAPP47736 663 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 PPP3CCP48454 512 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 PDE6CP51160 858 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 KCNB1Q14721 858 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 KRBA2Q6ZNG9 492 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SV2AQ7L0J3 742 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 RMDN1Q96DB5 314 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 DUS2Q9NX74 493 aaKnown RBP16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ANAPC1Q9H1A4 1944 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 CHURC1-FNTBB4DL54 471 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 HRO43593 1189 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 AKAP3O75969 853 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ASS1P00966 412 aaKnown RBP16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 OAS1P00973 400 aaKnown RBP16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 EGFP01133 1207 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 FNTBP49356 437 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 GALK1P51570 392 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 MCCD1P59942 119 aaPredicted RBP16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SLC7A9P82251 487 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 GRSF1Q12849 480 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 TAF10Q12962 218 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SGSM1Q2NKQ1 1148 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 SCARA5Q6ZMJ2 495 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 FAM35AQ86V20 835 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 LONP2Q86WA8 852 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 CPA6Q8N4T0 437 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 KIAA1958Q8N8K9 716 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 EZH1Q92800 747 aaPredicted RBP16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 ATP2A3Q93084 1043 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 RNF38Q9H0F5 515 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 LINC00597Q9H2U6 94 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 IL37Q9NZH6 218 aa16.86■□□□□ 0.29
SPTLC1P1-201ENST00000447199 NCDNQ9UBB6 729 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms