RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 TCEA3O75764 348 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 DAGLBQ8NCG7 672 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 MED10Q9BTT4 135 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PLK2Q9NYY3 685 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SLC39A10Q9ULF5 831 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PSMD13Q9UNM6 376 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PRR36Q9H6K5 1346 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 GRK2P25098 689 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 DDB1Q16531 1140 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 IL17AQ16552 155 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ZNF423Q2M1K9 1284 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PDCD6IPQ8WUM4 868 aaKnown RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 FAR2Q96K12 515 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 EPS8L2Q9H6S3 715 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 RBMX2Q9Y388 322 aaKnown RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 GOLGA8CPA6NN73 597 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PDZK1P1A8MUH7 402 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SERPINA6P08185 405 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 ALOX5P09917 674 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 EMC10Q5UCC4 262 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 DDIASQ8IXT1 998 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 MAGED2Q9UNF1 606 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PEX11AO75192 247 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 KRT6CP48668 564 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 CCNG1P51959 295 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 CLEC16AQ2KHT3 1053 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 CERKLQ49MI3 558 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 FAM47CQ5HY64 1035 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 AKAP14Q86UN6 197 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SNX32Q86XE0 403 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SYNE4Q8N205 404 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 NRBP2Q9NSY0 501 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 CACNA1DQ01668 2161 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 KIAA0556O60303 1618 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 LMBRD2Q68DH5 695 aaPredicted RBP8.17□□□□□ -1.1
SMG1-202ENST00000446231 PRUNE1Q86TP1 453 aa8.17□□□□□ -1.1
SMG1-202ENST00000446231 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 KCNN4O15554 427 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 AP3B2Q13367 1082 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ALYREFQ86V81 257 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 BHLHE22Q8NFJ8 381 aaPredicted RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 NEDD1Q8NHV4 660 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ATXN7L3BQ96GX2 97 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 FBXO6Q9NRD1 293 aaPredicted RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 EVPLLA8MZ36 301 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 SPIDRQ14159 915 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NACA2Q9H009 215 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 KCND2Q9NZV8 630 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 LRRIQ4A6NIV6 560 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 TTLL13PA6NNM8 815 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NBPF26B4DH59 902 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PGM3O95394 542 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 STIP1P31948 543 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 POU5F1BQ06416 359 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 FBXO36Q8NEA4 188 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 C17orf80Q9BSJ5 609 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 MAP3K13O43283 966 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ME2P23368 584 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CHKAP35790 457 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 RPL10AP62906 217 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 MCEEQ96PE7 176 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NMUR2Q9GZQ4 415 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ZNF804BA4D1E1 1349 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 RGSL1A5PLK6 1076 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PEX1O43933 1283 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 C12orf60Q5U649 245 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 KLHDC10Q6PID8 442 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 LAYNQ6UX15 382 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ZBTB8OSQ8IWT0 167 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 RYBPQ8N488 228 aaPredicted RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 DIS3LQ8TF46 1054 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 SLC5A5Q92911 643 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 BAIAP3O94812 1187 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 IL12RB1P42701 662 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PTK2BQ14289 1009 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 GALNTL6Q49A17 601 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 SCARA5Q6ZMJ2 495 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 LRRC39Q96DD0 335 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PRKG1Q13976 671 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 EARS2Q5JPH6 523 aaKnown RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 ZBTB41Q5SVQ8 909 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 DNAJC18Q9H819 358 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 NUP214P35658 2090 aaPredicted RBP8.16□□□□□ -1.1
SMG1-202ENST00000446231 PDLIM1O00151 329 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 GNA15P30679 374 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CMPK2Q5EBM0 449 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 ARMC4Q5T2S8 1044 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 RASGEF1CQ8N431 466 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 EFCAB3Q8N7B9 438 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 SCN3BQ9NY72 215 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 TMEM191BP0C7N4 346 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 CPA3P15088 417 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 PDIA6Q15084 440 aa8.16□□□□□ -1.1
SMG1-202ENST00000446231 LUZP2Q86TE4 346 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms