RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MMP19Q99542 508 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 COMMD3-BMI1R4GMX3 469 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 CNTNAP5Q8WYK1 1306 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 A0A0G2JLW4 131 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 CFAP99D6REC4 459 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 DFFAO00273 331 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 FCHO1O14526 889 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 XKR3Q5GH77 459 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 ATP8B4Q8TF62 1192 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 MYLK2Q9H1R3 596 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 LINC00854A0A1B0GVQ3 168 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 EVPLLA8MZ36 301 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 BGNP21810 368 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 TWF2Q6IBS0 349 aaKnown RBP19.3■□□□□ 0.68
SHANK3-203ENST00000445220 NANOGNBQ7Z5D8 188 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 ATG4AQ8WYN0 398 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 RMDN1Q96DB5 314 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 LRRC39Q96DD0 335 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 NOL6Q9H6R4 1146 aaKnown RBP19.3■□□□□ 0.68
SHANK3-203ENST00000445220 GDF3Q9NR23 364 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 USE1Q9NZ43 259 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 TBKBP1A7MCY6 615 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 MFN2O95140 757 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 CDC25CP30307 473 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 PDPK2PQ6A1A2 396 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 FASTKD5Q7L8L6 764 aaKnown RBP19.3■□□□□ 0.68
SHANK3-203ENST00000445220 OR8H2Q8N162 312 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 POLE3Q9NRF9 147 aa19.3■□□□□ 0.68
SHANK3-203ENST00000445220 PDZK1P1A8MUH7 402 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 ARMC4Q5T2S8 1044 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TSHZ1Q6ZSZ6 1077 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SLC25A41Q8N5S1 370 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 RBM46Q8TBY0 533 aaKnown RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TATDN2Q93075 761 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 ZNF669Q96BR6 464 aaPredicted RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 PACSIN1Q9BY11 444 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 AFF4Q9UHB7 1163 aaKnown RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 FAM95CA0A1B0GW59 222 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SLCO1B7G3V0H7 640 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TBC1D12O60347 775 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 FAM153BP0C7A2 387 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 MAPRE1Q15691 268 aaKnown RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 FAM153CQ494X1 144 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SEL1L3Q68CR1 1132 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 CENPTQ96BT3 561 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TRIM62Q9BVG3 475 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 CEP44Q9C0F1 390 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SIK2Q9H0K1 926 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 IL25Q9H293 177 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 ARHGAP20Q9P2F6 1191 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TSR3Q9UJK0 312 aaKnown RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SMNDC1O75940 238 aaKnown RBP eCLIP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 PSMG1O95456 288 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SFSWAPQ12872 951 aaKnown RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 ACAD10Q6JQN1 1059 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 ZFP1Q6P2D0 407 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 APBB2Q92870 758 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 SPATA33Q96N06 139 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 PLEKHA5Q9HAU0 1116 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TMEM8AQ9HCN3 771 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 TECPR2O15040 1411 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 C19orf81C9J6K1 198 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 COG2Q14746 738 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 PDK1Q15118 436 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 KIZQ2M2Z5 673 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 KYQ8NBH2 561 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 ST13P5Q8NFI4 369 aaPredicted RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 HDAC7Q8WUI4 952 aa19.29■□□□□ 0.68
SHANK3-203ENST00000445220 MMTAG2Q9BU76 263 aaKnown RBP19.29■□□□□ 0.68
SHANK3-203ENST00000445220 CES2O00748 559 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 CLASP2O75122 1294 aaKnown RBP19.28■□□□□ 0.68
SHANK3-203ENST00000445220 TSC22D2O75157 780 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 MMRN1Q13201 1228 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 SPDYCQ5MJ68 293 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 SLC26A11Q86WA9 606 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 SPATA17Q96L03 361 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 TEX13BQ9BXU2 312 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 DMAP1Q9NPF5 467 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-203ENST00000445220 PIK3C2BO00750 1634 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 RALBP11234 206 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 SNRPFP62306 86 aaKnown RBP19.28■□□□□ 0.68
SHANK3-203ENST00000445220 XRCC4Q13426 336 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 GTF2H3Q13889 308 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 KRT33BQ14525 404 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 ZNF235Q14590 738 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 WDR72Q3MJ13 1102 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 GJB7Q6PEY0 223 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 CNPY3Q9BT09 278 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 H2AFY2Q9P0M6 372 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-203ENST00000445220 CAPN1P07384 714 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 TTI2Q6NXR4 508 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 OLFML1Q6UWY5 402 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 CCDC149Q6ZUS6 474 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 CCNJLQ8IV13 435 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 OXNAD1Q96HP4 312 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-203ENST00000445220 ZNF560Q96MR9 790 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 A0A087WXM4 84 aa19.28■□□□□ 0.68
SHANK3-203ENST00000445220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-203ENST00000445220 TMEM191CA6NGB0 347 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms