RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GDE1Q9NZC3 331 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 TSPAN16Q9UKR8 245 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 CDH7Q9ULB5 785 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 FHOD1Q9Y613 1164 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 PRUNE2Q8WUY3 3088 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 A0A1B0GTH6 734 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 A0A1W2PQC6 194 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 NOL4O94818 638 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 SETSIPP0DME0 302 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 DDX6P26196 483 aaKnown RBP eCLIP14.91□□□□□ -0.02
SSBP3-208ENST00000444533 YWHAQP27348 245 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 KRT9P35527 623 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 STAT1P42224 750 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 EPHA5P54756 1037 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 BST2Q10589 180 aaKnown RBP14.91□□□□□ -0.02
SSBP3-208ENST00000444533 IFRD2Q12894 506 aaPredicted RBP14.91□□□□□ -0.02
SSBP3-208ENST00000444533 CNGA2Q16280 664 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 MTSS1LQ765P7 747 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 HS6ST3Q8IZP7 471 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 STKLD1Q8NE28 680 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 PDZD8Q8NEN9 1154 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 IQCDQ96DY2 449 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 KCNK16Q96T55 309 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 UHRF1Q96T88 793 aaPredicted RBP14.91□□□□□ -0.02
SSBP3-208ENST00000444533 CSNK1G1Q9HCP0 422 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 TRPM5Q9NZQ8 1165 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 CDH22Q9UJ99 828 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 REV3LO60673 3130 aa14.91□□□□□ -0.02
SSBP3-208ENST00000444533 A0A1W2PRU2 124 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 M0QYV0 167 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 BRD2P25440 801 aaKnown RBP14.9□□□□□ -0.02
SSBP3-208ENST00000444533 SLC5A3P53794 718 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 SNX16P57768 344 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 APBA1Q02410 837 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 ZP2Q05996 745 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 LCLAT1Q6UWP7 414 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 CLEC20AQ6ZU45 233 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 PAQR9Q6ZVX9 377 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 APTXQ7Z2E3 356 aaKnown RBP14.9□□□□□ -0.02
SSBP3-208ENST00000444533 ZNF397Q8NF99 534 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-208ENST00000444533 ING5Q8WYH8 240 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 FGF13Q92913 245 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 FBXO32Q969P5 355 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 NXPE3Q969Y0 559 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 MYRFLQ96LU7 910 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 NOX5Q96PH1 765 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 NUP58Q9BVL2 599 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 UBXN6Q9BZV1 441 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 LRRC4Q9HBW1 653 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 NLRC4Q9NPP4 1024 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 IFNKQ9P0W0 207 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 SIK3Q9Y2K2 1263 aa14.9□□□□□ -0.02
SSBP3-208ENST00000444533 F8VZ95 297 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 O00370 1275 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 FOXN3O00409 490 aaPredicted RBP14.89□□□□□ -0.03
SSBP3-208ENST00000444533 DPYSL4O14531 572 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 XPO1O14980 1071 aaKnown RBP14.89□□□□□ -0.03
SSBP3-208ENST00000444533 CYP26A1O43174 497 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 ABL1P00519 1130 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 TPM1P09493 284 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 ZNF132P52740 706 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 MTMR3Q13615 1198 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 NR1I3Q14994 352 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 TMC8Q8IU68 726 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 ZDHHC14Q8IZN3 488 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 GJD3Q8N144 294 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 SIX6OS1Q8N1H7 587 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 ITFG1Q8TB96 612 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 OVCA2Q8WZ82 227 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 SMOQ99835 787 aa14.89□□□□□ -0.03
SSBP3-208ENST00000444533 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.89□□□□□ -0.03
SSBP3-208ENST00000444533 XIRP2A4UGR9 3374 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 SOBPA7XYQ1 873 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 C2CD4DB7Z1M9 353 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 LOC730098B7Z3J9 87 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 RNF225M0QZC1 329 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TEX33O43247 280 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 LAMP2P13473 410 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 HMGA1P17096 107 aaKnown RBP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 CEBPBP17676 345 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 SOX5P35711 763 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 AVPR1AP37288 418 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 KLK7P49862 253 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 CACNA2D1P54289 1103 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TEAD2Q15562 447 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 MEA1Q16626 185 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 SLC5A9Q2M3M2 681 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 PRSS36Q5K4E3 855 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TADA2BQ86TJ2 420 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 NPAS3Q8IXF0 933 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 FAM71AQ8IYT1 594 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 ARHGAP18Q8N392 663 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 UBA3Q8TBC4 463 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 ZNF606Q8WXB4 792 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 GOLGA1Q92805 767 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 E2F7Q96AV8 911 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TCEAL4Q96EI5 215 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 MCRS1Q96EZ8 462 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms