RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SPOUT1Q5T280 376 aaKnown RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 CLEC20AQ6ZU45 233 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PAQR9Q6ZVX9 377 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMCO2Q7Z6W1 182 aaPredicted RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PIGZQ86VD9 579 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 CPNE8Q86YQ8 564 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 ZDHHC17Q8IUH5 632 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 KRT35Q92764 455 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 MYLPFQ96A32 169 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 SMARCD1Q96GM5 515 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 MS4A14Q96JA4 679 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 HSFY1Q96LI6 401 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 IL23AQ9NPF7 189 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 CYLDQ9NQC7 956 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 RNF14Q9UBS8 474 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 NOL12Q9UGY1 213 aaKnown RBP eCLIP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 V9GYY5 206 aaPredicted RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 ZBBXA8MT70 800 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 EFCAB8A8MWE9 144 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 DDX3YO15523 660 aaKnown RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 TADA3O75528 432 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 OAZ2O95190 189 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PSMA2P25787 234 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 MAN1A1P33908 653 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTNNA1P35221 906 aaKnown RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 MARCKSL1P49006 195 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PPIGQ13427 754 aaKnown RBP eCLIP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PIGHQ14442 188 aaPredicted RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 VARS2Q5ST30 1063 aaKnown RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 DAB2IPQ5VWQ8 1189 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 FUT10Q6P4F1 479 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM171BQ6P995 826 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 EMC1Q8N766 993 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 JOSD2Q8TAC2 188 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 UBXN4Q92575 508 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 ALG3Q92685 438 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 GOLGA1Q92805 767 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 CD101Q93033 1021 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PIWIL1Q96J94 861 aaKnown RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 RPGRIP1Q96KN7 1286 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 GPR62Q9BZJ7 368 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 CARD9Q9H257 536 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 LRRC4Q9HBW1 653 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 SMARCAL1Q9NZC9 954 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 EHD2Q9NZN4 543 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 PDE2AO00408 941 aaPredicted RBP9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 PAPSS1O43252 624 aaPredicted RBP9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 GRAP2O75791 330 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 BEST1O76090 585 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 BDNFP23560 247 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 SLC6A3Q01959 620 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 OGDHQ02218 1023 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 FPGSQ05932 587 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 ZNF252P-AS1Q0IIN9 211 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 ADIGQ0VDE8 80 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 BTG3Q14201 252 aaPredicted RBP9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTXN3Q4LDR2 81 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 TEX35Q5T0J7 233 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 OLFML1Q6UWY5 402 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 C4orf50Q6ZRC1 276 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMEM173Q86WV6 379 aaPredicted RBP9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 SPATA2LQ8IUW3 424 aaPredicted RBP9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 C7orf61Q8IZ16 206 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 SIX6OS1Q8N1H7 587 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 FNIP1Q8TF40 1166 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 BADQ92934 168 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 B3GALT6Q96L58 329 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMEM209Q96SK2 561 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 YME1L1Q96TA2 773 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 PCDHA3Q9Y5H8 950 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 VWA8A3KMH1 1905 aa9.99□□□□□ -0.81
SMPD4P1-203ENST00000443839 RANBP2P49792 3224 aaKnown RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 F8VP50 259 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 PGRMC1O00264 195 aaKnown RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 OR4Q2P0C623 313 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 FGFR3P22607 806 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTNNA2P26232 953 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 GJC1P36383 396 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 RPL34P49207 117 aaKnown RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 RWDD2BP57060 319 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 ZNF211Q13398 564 aaPredicted RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 NAA30Q147X3 362 aaPredicted RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 SLC39A12Q504Y0 691 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 ZNF280DQ6N043 979 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 LRRTM3Q86VH5 581 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 RHOT1Q8IXI2 618 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 NIPA2Q8N8Q9 360 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 RNPC3Q96LT9 517 aaKnown RBP9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 KCNK16Q96T55 309 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 PKMYT1Q99640 499 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 PLVAPQ9BX97 442 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 RHOBTB2Q9BYZ6 727 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMLHEQ9NVH6 421 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 CEP290O15078 2479 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 ALPK3Q96L96 1907 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 PSTPIP1O43586 416 aa9.98□□□□□ -0.81
SMPD4P1-203ENST00000443839 GABBR2O75899 941 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms