RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 B2RBV5 119 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 NDST1P52848 882 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 FOXD4Q12950 439 aaPredicted RBP23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 ANGPTL8Q6UXH0 198 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 ELMO2Q96JJ3 720 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 CATSPERBQ9H7T0 1116 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 FAM8A1Q9UBU6 413 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 TSPAN16Q9UKR8 245 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 UBA1P22314 1058 aaKnown RBP23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 GTF2BQ00403 316 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 NAPEPLDQ6IQ20 393 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 VCPIP1Q96JH7 1222 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 L3MBTL3Q96JM7 780 aaPredicted RBP23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 FRMD8P1Q9BZ68 369 aaPredicted RBP23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 AP4E1Q9UPM8 1137 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 KCNH4Q9UQ05 1017 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 REXO2Q9Y3B8 237 aaKnown RBP23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 RNF103-CHMP3A0A140T963 221 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 IGF2BP3O00425 579 aaKnown RBP eCLIP23.31■■□□□ 1.329e-8■■□□□ 13.2
CTDSPL-206ENST00000443503 CPA2P48052 419 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 VCPP55072 806 aaKnown RBP23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 IL31Q6EBC2 164 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 ADGRF2Q8IZF7 708 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 IKZF4Q9H2S9 585 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 SNTG2Q9NY99 539 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 CPA4Q9UI42 421 aa23.31■■□□□ 1.32
CTDSPL-206ENST00000443503 LOC100653049A0A140TA62 436 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 KRT34O76011 436 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 ATICP31939 592 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 CHSY1Q86X52 802 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 EFHBQ8N7U6 833 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 TMEM161BQ8NDZ6 487 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 THTPAQ9BU02 230 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 FGFBP2Q9BYJ0 223 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 TRIM15Q9C019 465 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 KRT82Q9NSB4 513 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 AFF4Q9UHB7 1163 aaKnown RBP23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 MTO1Q9Y2Z2 717 aaKnown RBP23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 DLG5Q8TDM6 1919 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 SNHG28P0DPA3 235 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 HNRNPH3P31942 346 aaKnown RBP23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 FBXO47Q5MNV8 452 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 AADACL2Q6P093 401 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 ELMOD1Q8N336 334 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 AVENQ9NQS1 362 aaPredicted RBP23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 PHTF1Q9UMS5 762 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 TGFB1I1O43294 461 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 NNMTP40261 264 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 ZNF844Q08AG5 666 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 TMEM139Q8IV31 216 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 PAFAH2Q99487 392 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 CYP39A1Q9NYL5 469 aa23.3■■□□□ 1.32
CTDSPL-206ENST00000443503 DGKZQ13574 1117 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 GLT1D1Q96MS3 346 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 OSBPL1AQ9BXW6 950 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 DNAJC18Q9H819 358 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 SLC40A1Q9NP59 571 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 BARX2Q9UMQ3 279 aaPredicted RBP23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 RAD51Q06609 339 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 FAM117BQ6P1L5 589 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 LNX1Q8TBB1 728 aaPredicted RBP23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 PORCNQ9H237 461 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 CACNA1FO60840 1977 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 TLR2O60603 784 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 HADHAP40939 763 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 NKX2-3Q8TAU0 364 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 CHST7Q9NS84 486 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 SPATS2LQ9NUQ6 558 aaKnown RBP23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 ZC3H4Q9UPT8 1303 aaKnown RBP23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 MCF2P10911 925 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 MYL2P10916 166 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 TGM2P21980 687 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 NFIL3Q16649 462 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 MAP1SQ66K74 1059 aaPredicted RBP23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 SLFN11Q7Z7L1 901 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 GDF3Q9NR23 364 aa23.29■■□□□ 1.32
CTDSPL-206ENST00000443503 RIPK2O43353 540 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 NPM3O75607 178 aaKnown RBP23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 ENO3P13929 434 aaPredicted RBP23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 TMEM259Q4ZIN3 620 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 PCDH9Q9HC56 1237 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 MRPL40Q9NQ50 206 aaKnown RBP23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 NAALADL1Q9UQQ1 740 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 MAP2K7O14733 419 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 ATXN8OSP0DMR3 200 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 FDFT1P37268 417 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 ETFBP38117 255 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 GANCQ8TET4 914 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 SGF29Q96ES7 293 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 APOL2Q9BQE5 337 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 KCNA2P16389 499 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 RGS2P41220 211 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 GRIK4Q16099 956 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 ZNF384Q8TF68 577 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 MTBPQ96DY7 904 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 MRPL46Q9H2W6 279 aaKnown RBP23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 ASB7Q9H672 318 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 TRPC7Q9HCX4 862 aa23.28■■□□□ 1.32
CTDSPL-206ENST00000443503 OLA1Q9NTK5 396 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms