RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MAN2B1O00754 1011 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 CD44P16070 742 aaKnown RBP22.38■■□□□ 1.17
CDKN3-204ENST00000442975 TRIM21P19474 475 aaKnown RBP22.38■■□□□ 1.17
CDKN3-204ENST00000442975 UBE2HP62256 183 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 TNK2Q07912 1038 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 SLC2A14Q8TDB8 520 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 FAM3CQ92520 227 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 SMARCD1Q96GM5 515 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 KIF9Q9HAQ2 790 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 DMAP1Q9NPF5 467 aaPredicted RBP22.38■■□□□ 1.17
CDKN3-204ENST00000442975 SPATA6Q9NWH7 488 aaPredicted RBP22.38■■□□□ 1.17
CDKN3-204ENST00000442975 TRPM5Q9NZQ8 1165 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 CTNND2Q9UQB3 1225 aa22.38■■□□□ 1.17
CDKN3-204ENST00000442975 C2orf78A6NCI8 922 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 AP1G2O75843 785 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 ABL1P00519 1130 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 CCNE1P24864 410 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 MRE11P49959 708 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 PLCB2Q00722 1185 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 UNC93AQ86WB7 457 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 ZC3H3Q8IXZ2 948 aaKnown RBP22.37■■□□□ 1.17
CDKN3-204ENST00000442975 FBXL13Q8NEE6 735 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 DHTKD1Q96HY7 919 aaPredicted RBP22.37■■□□□ 1.17
CDKN3-204ENST00000442975 SLC22A12Q96S37 553 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 OSBPL6Q9BZF3 934 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 GTSE1Q9NYZ3 720 aa22.37■■□□□ 1.17
CDKN3-204ENST00000442975 ARMCX3Q9UH62 379 aaPredicted RBP22.37■■□□□ 1.17
CDKN3-204ENST00000442975 PIEZO1Q92508 2521 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 SOBPA7XYQ1 873 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 NCAM2O15394 837 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 USP17L7P0C7H9 530 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 HOXD11P31277 338 aaPredicted RBP22.36■■□□□ 1.17
CDKN3-204ENST00000442975 PPP1R2P41236 205 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 INCA1Q0VD86 236 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 CBWD6Q4V339 395 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 CBWD3Q5JTY5 395 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 CBWD5Q5RIA9 395 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 CC2D1AQ6P1N0 951 aaPredicted RBP22.36■■□□□ 1.17
CDKN3-204ENST00000442975 FUKQ8N0W3 1084 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 ARL14EPQ8N8R7 260 aaPredicted RBP22.36■■□□□ 1.17
CDKN3-204ENST00000442975 C12orf29Q8N999 325 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 RIN3Q8TB24 985 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 NELFBQ8WX92 580 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 SEMA4DQ92854 862 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 TWNKQ96RR1 684 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 CYP2S1Q96SQ9 504 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 KCNK16Q96T55 309 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 NELL2Q99435 816 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 TTLL2Q9BWV7 592 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 CYP3A43Q9HB55 503 aa22.36■■□□□ 1.17
CDKN3-204ENST00000442975 SHISA7A6NL88 538 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 BMP6P22004 513 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 ADORA2BP29275 332 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 TAF10Q12962 218 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 MORC3Q14149 939 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 CCDC40Q4G0X9 1142 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 TRIM68Q6AZZ1 485 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 PAQR9Q6ZVX9 377 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 C1orf210Q8IVY1 113 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 MSANTD3Q96H12 275 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 SLITRK1Q96PX8 696 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 NT5C1AQ9BXI3 368 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 RAB20Q9NX57 234 aa22.35■■□□□ 1.17
CDKN3-204ENST00000442975 SPECC1L-ADORA2AF8WAN1 911 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 FAM200BP0CF97 657 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 YWHAQP27348 245 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 PDE6CP51160 858 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 SLC5A3P53794 718 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 ZNF268Q14587 947 aaPredicted RBP22.34■■□□□ 1.17
CDKN3-204ENST00000442975 MTF1Q14872 753 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 CAMK4Q16566 473 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 WDR44Q5JSH3 913 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 FRMD5Q7Z6J6 570 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 NUP93Q8N1F7 819 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 FBXO32Q969P5 355 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 JAKMIP2Q96AA8 810 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 EBF3Q9H4W6 596 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 C8orf33Q9H7E9 229 aaPredicted RBP22.34■■□□□ 1.17
CDKN3-204ENST00000442975 GKN1Q9NS71 199 aa22.34■■□□□ 1.17
CDKN3-204ENST00000442975 BICDL2A1A5D9 508 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 ZNF840PA6NDX5 716 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 CILPO75339 1184 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 RTN3O95197 1032 aaPredicted RBP22.33■■□□□ 1.17
CDKN3-204ENST00000442975 HDCP19113 662 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 CTHP32929 405 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 MAGEA9P43362 315 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 STX17P56962 302 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 MAP3K7CLP57077 242 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 USP4Q13107 963 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 ITPRIPL2Q3MIP1 535 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 ZNF394Q53GI3 561 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 TTI2Q6NXR4 508 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 CRYBG2Q8N1P7 616 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 SCAMP5Q8TAC9 235 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 SH3RF2Q8TEC5 729 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 CEP63Q96MT8 703 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 ARID3AQ99856 593 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 DNAI2Q9GZS0 605 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 GCNT4Q9P109 453 aa22.33■■□□□ 1.17
CDKN3-204ENST00000442975 PPP1R3GB7ZBB8 358 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms