RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 RIN3Q8TB24 985 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 SLC22A12Q96S37 553 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 KIF9Q9HAQ2 790 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 TRPC7Q9HCX4 862 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 TDP1Q9NUW8 608 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 MRPS17Q9Y2R5 130 aaKnown RBP23.53■■□□□ 1.36
HDLBP-220ENST00000442730 F5P12259 2224 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 ATP8B3O60423 1300 aa23.53■■□□□ 1.36
HDLBP-220ENST00000442730 MAN2B1O00754 1011 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 STX10O60499 249 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 CCNE1P24864 410 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 MLLT6P55198 1093 aaPredicted RBP23.52■■□□□ 1.36
HDLBP-220ENST00000442730 PLCB2Q00722 1185 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 MORC3Q14149 939 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 FUKQ8N0W3 1084 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 CRYBG2Q8N1P7 616 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 CSGALNACT1Q8TDX6 532 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 SEMA4DQ92854 862 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 CLDN23Q96B33 292 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 DHTKD1Q96HY7 919 aaPredicted RBP23.52■■□□□ 1.36
HDLBP-220ENST00000442730 NELL2Q99435 816 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 CYP3A43Q9HB55 503 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 KRT82Q9NSB4 513 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 EHD2Q9NZN4 543 aa23.52■■□□□ 1.36
HDLBP-220ENST00000442730 TRAV19A0A0A6YYK7 116 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 C2orf78A6NCI8 922 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 CCDC130P13994 396 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 UBE2HP62256 183 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 DCAF17Q5H9S7 520 aaPredicted RBP23.51■■□□□ 1.35
HDLBP-220ENST00000442730 CCDC150Q8NCX0 1101 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 FBXL13Q8NEE6 735 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 SMARCD1Q96GM5 515 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 TWNKQ96RR1 684 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 MED10Q9BTT4 135 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 GCNT4Q9P109 453 aa23.51■■□□□ 1.35
HDLBP-220ENST00000442730 PPP1R3GB7ZBB8 358 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 CKMP06732 381 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 PPP1R2P41236 205 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 SOX9P48436 509 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 MRE11P49959 708 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 TNK2Q07912 1038 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 FZD5Q13467 585 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 CBWD6Q4V339 395 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 CBWD3Q5JTY5 395 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 CBWD5Q5RIA9 395 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 C1orf210Q8IVY1 113 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 SLC2A14Q8TDB8 520 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 MSANTD3Q96H12 275 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 CYP2S1Q96SQ9 504 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 KCNK16Q96T55 309 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 DMAP1Q9NPF5 467 aaPredicted RBP23.5■■□□□ 1.35
HDLBP-220ENST00000442730 FAM49BQ9NUQ9 324 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 THG1LQ9NWX6 298 aaKnown RBP23.5■■□□□ 1.35
HDLBP-220ENST00000442730 GTSE1Q9NYZ3 720 aa23.5■■□□□ 1.35
HDLBP-220ENST00000442730 NDRG2Q9UN36 371 aaKnown RBP23.5■■□□□ 1.35
HDLBP-220ENST00000442730 ZNF840PA6NDX5 716 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 BIN1O00499 593 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 CILPO75339 1184 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 USP17L7P0C7H9 530 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 MAGEA9P43362 315 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 RPS9P46781 194 aaKnown RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 KPNA1P52294 538 aaPredicted RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 USP4Q13107 963 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 TCERG1LQ5VWI1 586 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 KLHL10Q6JEL2 608 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 TTI2Q6NXR4 508 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 ALYREFQ86V81 257 aaKnown RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 ARL14EPQ8N8R7 260 aaPredicted RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 C12orf29Q8N999 325 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 TTC8Q8TAM2 541 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 FAM3CQ92520 227 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 SLC35C1Q96A29 364 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 DUSP9Q99956 384 aaKnown RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 FAM83CQ9BQN1 747 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 C8orf33Q9H7E9 229 aaPredicted RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 RAB20Q9NX57 234 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 TRPM5Q9NZQ8 1165 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 ARMCX3Q9UH62 379 aaPredicted RBP23.49■■□□□ 1.35
HDLBP-220ENST00000442730 USP34Q70CQ2 3546 aa23.49■■□□□ 1.35
HDLBP-220ENST00000442730 PATJQ8NI35 1801 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 VPS13AQ96RL7 3174 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 AP1G2O75843 785 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 CD58P19256 250 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 CTHP32929 405 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 NBL1P41271 181 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 TAF10Q12962 218 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 ZNF77Q15935 545 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 FOXR2Q6PJQ5 311 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 NUP93Q8N1F7 819 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 WHAMMQ8TF30 809 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 NELFBQ8WX92 580 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 CEP63Q96MT8 703 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 NT5C1AQ9BXI3 368 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 HPS4Q9NQG7 708 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 CTNND2Q9UQB3 1225 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 ANAPC1Q9H1A4 1944 aa23.48■■□□□ 1.35
HDLBP-220ENST00000442730 ZFHX2Q9C0A1 2572 aaPredicted RBP23.48■■□□□ 1.35
HDLBP-220ENST00000442730 SPECC1L-ADORA2AF8WAN1 911 aa23.47■■□□□ 1.35
HDLBP-220ENST00000442730 TNFRSF10BO14763 440 aa23.47■■□□□ 1.35
HDLBP-220ENST00000442730 NCAM2O15394 837 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms